[Fri Aug 26 17:46:43 2016] >Input file: TMQ9QBZ0M1D.pdb >TM segments: 133-141_ 193-209 MAIDEN score = 13.1153 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I195 -T201 10 I195 -L202 1.22188412250291 L194 -T201 0.912974539934197 R193 -L202 0.615002540984512 L194 -S200 0.460039163518806 I195 -C206 0.291953196106597 C197 -T203 0.265364551415925 R193 -N198 0.198738739873986 L194 -L202 0.161185999444251 I195 -T203 0.153954078564636 R193 -Q204 0.140161918465051 N196 -L202 0.13460172948817 R193 -T199 0.11210821605851 R193 -T201 0.0815697867663019 I195 -Q204 0.0324311457278965 I195 -S200 0.0143376528356773 I195 -A205 -0.0215410786443702 Q204 -V209 -0.0256357137958194 R193 -T203 -0.0403998060896937 L194 -Q204 -0.0553603771318931 N198 -T203 -0.0671331465696747 R193 -S200 -0.0742146052549613 N196 -Q204 -0.0759934563628217 N196 -T201 -0.122405456616712 N196 -T203 -0.188135379259422 C197 -Q204 -0.20060007436747 L194 -T199 -0.231503860410338 C197 -L202 -0.271460528316084 L194 -T203 -0.306653571722771