[Mon Aug 29 17:46:06 2016] >Input file: TMQ9QBZ0S5G.pdb >TM segments: 629-646 MAIDEN score = -4.7100 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L639 -Q644 0.342739193143098 D634 -L639 0.274013391081444 T633 -E641 0.271987842290131 Y637 -N645 0.203196992885465 N631 -L639 0.187663303377098 Y637 -S642 0.167221810079447 I636 -E641 0.132960113713267 Y632 -Y637 0.10007475985371 D634 -S642 0.0841906624890532 T633 -S642 0.074086106052889 G630 -Y637 0.0343260828644931 G630 -R638 0.0321413022599439 I640 -N645 0.0310016649296694 N631 -I636 0.030352860922487 I629 -D634 0.0279394547685404 R638 -A643 0.0270248149044541 I636 -Q646 0.0237823320200397 T633 -A643 0.023407825737372 I640 -Q646 -0.0247424084210373 I636 -Q644 -0.0258586274291011 N631 -R638 -0.0321219729929796 T635 -Q644 -0.0321592737609324 R638 -Q646 -0.0689312120281882 Y637 -Q646 -0.0732639310135914 Y632 -R638 -0.0821253684751699 D634 -E641 -0.0974588146546457 I629 -R638 -0.0987427076846084 G630 -L639 -0.105457794316991 I636 -N645 -0.108087756545875 T635 -A643 -0.114948865540531 Y632 -E641 -0.115961768565373 Y632 -L639 -0.115982210338544 R638 -N645 -0.121412479584732 N631 -I640 -0.136979326796327 I629 -I636 -0.146055717157318 R638 -Q644 -0.149088702729247 D634 -I640 -0.156084970055885 D634 -A643 -0.156682527205728 Y637 -A643 -0.15673784439202 I629 -Y637 -0.179221285373989 I636 -S642 -0.19677910049924 T633 -R638 -0.200548743021333 Y632 -I640 -0.203922815111691 T635 -I640 -0.204011459708737 L639 -N645 -0.204477880440697 T635 -E641 -0.206628425306917 T633 -I640 -0.21463535983955 T635 -S642 -0.226733307265573 I629 -T635 -0.245395587056751 E641 -Q646 -0.259221448167261 G630 -I636 -0.268742040239476 I636 -A643 -0.271201115479092 L639 -Q646 -0.290728103240573 T633 -L639 -0.307496064103299 G630 -T635 -0.337123625080575 Y637 -Q644 -0.342053227193609 N631 -Y637 -0.500283447858087