[Mon Aug 29 17:46:40 2016] >Input file: TMQ9QBZ4S4G.pdb >TM segments: 622-639 MAIDEN score = -3.5809 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L632 -Q637 0.378341032347008 T626 -E634 0.272987322603839 S631 -Q639 0.256314778845368 S631 -N638 0.252045164177371 Y630 -D635 0.227822644044499 Y630 -N638 0.204665460391318 N624 -L632 0.19749816345003 N624 -S631 0.181299640568055 K627 -L632 0.171944888727816 I622 -K627 0.15663003977319 I629 -E634 0.131704603600147 Y625 -Y630 0.100659224512907 K627 -D635 0.0934047561801727 D623 -S631 0.0788024821726483 I633 -N638 0.031343453861539 N624 -I629 0.029183530269877 I629 -Q639 0.0247021739238242 T626 -A636 0.023407825737372 K627 -E634 0.0150658385005844 T626 -D635 -0.00417725042026618 I633 -Q639 -0.0250870561451872 I629 -Q637 -0.0259338551599049 D623 -I633 -0.0288771882025562 T628 -Q637 -0.0323756004973681 I622 -S631 -0.0328540807802015 S631 -Q637 -0.0335490128128563 Y625 -S631 -0.0595093656960292 Y630 -Q639 -0.072490811005354 I629 -D635 -0.106489947806547 I629 -N638 -0.107968221943552 T628 -A636 -0.114574161452501 Y625 -E634 -0.116021995780075 D623 -I629 -0.128587492027295 D623 -T628 -0.130605008385889 Y625 -L632 -0.132799686912456 T626 -S631 -0.133673124951281 I622 -I629 -0.135058875057188 D623 -L632 -0.135525316900051 K627 -A636 -0.138401111814569 N624 -I633 -0.140766481722048 K627 -I633 -0.153805069455472 Y630 -A636 -0.160312548677067 I622 -Y630 -0.169300324008493 D623 -Y630 -0.185768897725882 L632 -N638 -0.193784042291105 Y625 -I633 -0.202988288941255 T628 -E634 -0.206497696278933 T628 -I633 -0.207174082463898 T626 -I633 -0.214361267221804 T628 -D635 -0.226070730321371 I622 -T628 -0.234409743356281 E634 -Q639 -0.259410024169272 I629 -A636 -0.269850055878023 L632 -Q639 -0.307632147961302 T626 -L632 -0.308709394652502 Y630 -Q637 -0.345167237021809 S631 -A636 -0.427978091590793 N624 -Y630 -0.500180854109591