[Mon Aug 29 17:48:09 2016] >Input file: TMQ9QGQ5M1G.pdb >TM segments: 76-108 MAIDEN score = 7.9449 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V77 -I88 2.19517003545624 C76 -W90 1.51242891428314 V77 -W87 1.01185576778752 Q79 -Q84 0.904186747091391 C76 -I88 0.819198271464349 C76 -N91 0.692739828960502 P94 -L99 0.580388588502406 E78 -I88 0.559490273149716 V77 -I86 0.468464354716449 E78 -W87 0.440830658449848 S80 -S85 0.425020847940222 N91 -P103 0.349532413973693 E78 -R83 0.288349432113467 Q79 -I86 0.286075931313822 V77 -T89 0.251503966277801 T89 -Q102 0.248652206831454 Q79 -T89 0.244257795702618 N91 -C100 0.235511278090465 Q93 -Q102 0.202274430614051 Q93 -C100 0.201043780236863 H82 -W87 0.18414824450581 N91 -L99 0.183764550062182 G81 -I86 0.165025600508406 W87 -T106 0.156838591086718 E78 -I86 0.14573783941576 V77 -H82 0.127782987614478 E78 -N91 0.123992581254879 A92 -Q102 0.11946933587703 V77 -W90 0.117674276387132 P94 -A101 0.1167328417622 V77 -S85 0.106064731775792 W87 -N105 0.104441621708387 L96 -A101 0.0979542089554074 A92 -A101 0.0978760598430863 C76 -S104 0.0943051528085408 V77 -R83 0.0938229892386975 W90 -T106 0.0937031670618991 V77 -A92 0.0929078011022217 A101 -T106 0.0919005869912279 C76 -A92 0.08943060261325 A92 -P103 0.0852905937212611 C76 -W87 0.0823745010218264 V77 -N91 0.081460070024638 N91 -S104 0.0813163381334894 S80 -W87 0.071977147312397 P94 -C100 0.0717754441294995 W87 -S104 0.0706891610003051 I86 -T106 0.0609640117351127 A92 -T98 0.0609273177805258 G81 -W87 0.0561944792750582 C100 -N105 0.0463422143796111 T89 -A101 0.033467481365649 Q102 -T108 0.0334643430397739 T89 -N105 0.0332538474548965 N91 -N105 0.0319438524275136 C76 -T89 0.0313510010158629 W90 -S104 0.0309103484821627 E78 -S85 0.026375466370923 I88 -N105 0.0254338912386816 Q84 -T89 0.0137518552041715 A92 -Q97 0.00892657327018082 C100 -T106 0.00861865365494618 A92 -N105 -0.00252089654234355 Q93 -A101 -0.00602167816841082 E78 -T89 -0.00654483281103291 W90 -Q102 -0.0201040098205088 V95 -A101 -0.0252081070683624 A101 -V107 -0.0259472509259786 T89 -T106 -0.0303882107035575 A92 -C100 -0.0371173771914519 S85 -W90 -0.0392886210870598 W90 -N105 -0.045673840142521 V77 -S104 -0.0511597230484124 W90 -A101 -0.053942535717483 I88 -T106 -0.0562647735351764 Q93 -T98 -0.0705575899354303 N91 -Q102 -0.0748794325141695 N91 -A101 -0.0769002268395624 S80 -I88 -0.0822115948562695 I88 -S104 -0.0832599844235511 R83 -I88 -0.0834564938344604 I86 -S104 -0.0931382224048658 S80 -I86 -0.0969312088409673 W90 -P103 -0.109817818201813 T89 -V107 -0.112158583688301 T89 -P103 -0.113707537672058 P94 -Q102 -0.116522242795719 N91 -T106 -0.118807946470902 Q79 -W87 -0.125082484207617 A92 -S104 -0.126015362340162 V95 -C100 -0.126080024140382 L99 -N105 -0.126117868137056 C76 -N105 -0.129993997653113 C76 -Q93 -0.131660510280934 P103 -T108 -0.151586943196612 I86 -N91 -0.155664210711703 I86 -N105 -0.161250723584322 L99 -S104 -0.177107857996303 C76 -Q84 -0.189022111554627 E78 -W90 -0.197435755084917 Q79 -S85 -0.198477647205197 W87 -V107 -0.203373168801757 A92 -L99 -0.229813150439668 T89 -S104 -0.239622944157419 E78 -Q84 -0.242366466819115 Q79 -I88 -0.266487824776803 W90 -C100 -0.334820496631488 Q93 -L99 -0.380311668861912 V77 -Q84 -0.392559495462808 C76 -S85 -0.400889494170375 Q102 -V107 -0.460973343893858 C76 -I86 -0.643250159043953