[Mon Aug 29 17:50:04 2016] >Input file: TMQ9QUJ0S1G.pdb >TM segments: A30-58 MAIDEN score = -13.1420 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S32A-A37A 0.341873593852899 M46A-V56A 0.248593183083822 D43A-L48A 0.198260926736854 A37A-A44A 0.165561336218943 A37A-V45A 0.134528428113749 S32A-V40A 0.113846180218671 V40A-L48A 0.104200766833271 L35A-V40A 0.0945839045001282 M46A-V51A 0.0932684747433417 L39A-L48A 0.0894453628179295 L36A-A44A 0.0817280418347957 A44A-G52A 0.0809420721796417 T30A-A37A 0.0772923134210677 G38A-S47A 0.0677268457952755 A44A-V53A 0.0672860076145945 L33A-A41A 0.0669621829476266 L33A-G38A 0.049513869905554 L33A-A42A 0.0369121723163044 A41A-L48A 0.0334439012545094 L39A-S47A 0.0284035422396589 L49A-M58A 0.0281933796423184 L35A-D43A 0.0276717608219714 G38A-M46A 0.0252635201023466 V45A-V54A 0.0245072321875917 M46A-F55A 0.0226575345972173 P34A-A42A 0.0202869536914907 S47A-F55A 0.0120028550874415 L31A-L36A 0.00949765993957552 A42A-I50A 0.00276297200764522 A37A-M46A -0.00129813109864241 M46A-G52A -0.0125304941129611 I50A-V56A -0.0267106874474372 V40A-V45A -0.0286158852392102 D43A-V51A -0.035790001445335 L31A-A37A -0.0360588295690325 L49A-V54A -0.0372912005601567 I50A-M58A -0.0425056760446197 L48A-F55A -0.0434614452692879 A42A-V51A -0.0441016215187373 L31A-L39A -0.0457988610233198 G38A-D43A -0.0467736721529599 S32A-A41A -0.0470040798869649 T30A-G38A -0.0477419432538313 P34A-D43A -0.0512282172215833 A41A-L49A -0.0549113076218735 L48A-C57A -0.0641851499776651 M46A-V54A -0.0671039725118661 L49A-C57A -0.0704632254762654 L36A-V45A -0.0729022189952486 I50A-C57A -0.0743818116548294 D43A-G52A -0.0879975079996429 L33A-D43A -0.0898969246953829 V45A-V53A -0.0921623135690548 S47A-V56A -0.0923083034828698 S32A-G38A -0.0975335822341269 D43A-I50A -0.0985845050391072 L35A-A44A -0.105056814897333 L31A-V40A -0.110248615686323 V51A-M58A -0.110456133230676 V40A-L49A -0.111254809090875 L49A-F55A -0.122339516127378 P34A-L39A -0.128604984920187 V45A-G52A -0.134278580842432 P34A-A41A -0.142271445729671 A41A-I50A -0.146218493711985 G38A-V45A -0.146646600588765 A44A-V51A -0.147439304712838 L36A-D43A -0.153376611353944 A42A-L48A -0.167694384502305 A37A-D43A -0.172872538069472 L31A-G38A -0.176507570977988 L48A-V56A -0.177160624357436 V45A-I50A -0.177202336743834 G52A-M58A -0.187886387091438 I50A-F55A -0.197231651622268 P34A-V40A -0.199290535798724 D43A-V53A -0.20453056051362 S32A-L39A -0.220385132085585 D43A-L49A -0.22327941764525 L36A-A42A -0.225735610139886 T30A-L36A -0.226588555522571 A41A-S47A -0.227735007241908 V51A-V56A -0.232381826403872 L36A-A41A -0.238039607046191 A42A-L49A -0.241613590228548 L35A-A42A -0.24330224387487 G52A-C57A -0.244450269726138 S47A-G52A -0.245327595357234 G38A-A44A -0.246778861171788 A41A-M46A -0.261293715001788 L35A-A41A -0.262426457278432 A44A-L49A -0.26250251309026 L33A-V40A -0.280154512685407 L49A-V56A -0.282623238322091 V40A-S47A -0.293134648366738 L39A-M46A -0.301393314800146 L39A-A44A -0.30268291199087 T30A-L35A -0.306250766854932 M46A-V53A -0.307634529147773 S47A-V54A -0.312529373525958 V45A-V51A -0.323571307354131 V53A-M58A -0.33797992855647 A44A-I50A -0.340336273807801 S47A-V53A -0.353779072694939 V40A-M46A -0.361547452814299 L39A-V45A -0.375292821393186 L48A-V53A -0.390809503411072 A37A-A42A -0.403740235485375 L48A-V54A -0.405986302693558 L33A-L39A -0.443877913165112 A42A-S47A -0.51256803033172 V51A-C57A -0.52357877695876