[Mon Aug 29 17:50:24 2016] >Input file: TMQ9QUL7M2G.pdb >TM segments: 128-138_ 152-165_ 167-175 MAIDEN score = 2.3959 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W156 -L171 1.04463392276476 Y158 -L165 0.64522056743256 L129 -P135 0.560587076766069 L129 -Q134 0.555651644094958 E161 -P168 0.495046587593927 W156 -Q172 0.488643689926236 A128 -V133 0.469570108953034 P168 -E173 0.439429861156406 W156 -N170 0.435550596820049 W156 -Y169 0.43506077793142 W156 -P168 0.390722389056222 E161 -P167 0.370092792129369 T154 -L171 0.356167267142768 A128 -Q134 0.320168188630734 Y158 -P168 0.294606860852638 G155 -G160 0.285047196224687 T154 -P167 0.237593369072209 V153 -K175 0.236926397724321 V153 -Q172 0.235454164541261 P164 -N170 0.233586867474846 G160 -Q172 0.224110841003965 V153 -Y158 0.209033830131377 W156 -P167 0.20732380654903 E163 -N170 0.195562492053142 G155 -E173 0.190119965228656 E163 -Y169 0.180351174026847 T159 -P164 0.170431957325633 V136 -V153 0.166030020639899 Y158 -E173 0.150465681080297 T159 -E173 0.145356401558562 Y158 -Y169 0.139460181566587 S130 -V136 0.134855926318106 P164 -Q172 0.133466995091968 Y158 -N170 0.12834714140822 L129 -V136 0.128104361899522 Y158 -A174 0.125786854875969 S131 -V136 0.118310134236812 W156 -A174 0.113931430781302 G160 -A174 0.109410982693644 G162 -P167 0.104209552628876 W156 -E173 0.103659973074604 G155 -P164 0.0931625610505415 S130 -C137 0.0856895215298457 G155 -K175 0.0854480645504284 T159 -A174 0.0606868333424497 W152 -E173 0.0548715446122407 W156 -E161 0.0524276804198022 V136 -G155 0.051802315356848 Y158 -L171 0.0497346129516085 T159 -K175 0.0401094101440896 G157 -G162 0.0369030663331218 G160 -E173 0.0289817275443323 G160 -N170 0.0276031204674507 W152 -A174 0.0219389912264698 V153 -T159 0.0219310736292795 E161 -Q172 0.0178803991772274 L129 -C137 0.0171847237343192 G157 -P168 0.0155423742019636 V153 -G160 0.0153674362729115 V153 -E173 0.0141531367277743 G155 -L165 0.0132443060273184 T159 -P167 0.0130401887242906 G160 -P167 0.00996041317008611 V136 -T154 0.00695750719548061 G160 -Y169 0.00341849547934547 G157 -A174 -0.000453094379792685 G160 -P168 -0.00125352665917111 G155 -E163 -0.00284730685220058 W152 -G157 -0.00415106694602407 Q132 -L171 -0.0144604013559766 V153 -N170 -0.0212233241971203 G157 -Q172 -0.0226402757919928 E163 -Q172 -0.0313150843285283 G162 -P168 -0.0325679693605354 A128 -V136 -0.0362249328176216 G157 -P164 -0.0372706338108755 T154 -A174 -0.0460779156562183 T154 -G160 -0.0532312648207862 P168 -A174 -0.0548920488376057 G157 -E173 -0.0578121937300899 G155 -Q172 -0.0600410066316126 G157 -L165 -0.0611832478338172 P135 -T154 -0.0670413089254414 G155 -E161 -0.0703562709005134 V153 -P168 -0.0706390137089168 G160 -L171 -0.0737002449975996 T154 -T159 -0.0740394030989897 L165 -N170 -0.0775128542969346 G155 -P168 -0.0781547688177611 G157 -N170 -0.0869163410926226 T154 -Y169 -0.0905908843470034 W156 -P164 -0.0916017616037941 T159 -P168 -0.0937715460419062 V136 -W152 -0.0974612960481338 W152 -Q172 -0.104579774527614 G157 -Y169 -0.107356934508146 V133 -L171 -0.107374419562563 G160 -L165 -0.110823035971458 T159 -Q172 -0.112963886262215 A128 -P135 -0.115249799676301 T159 -Y169 -0.119165619478044 T154 -K175 -0.120361686880304 G155 -L171 -0.127575452851769 T154 -N170 -0.130976273865764 W156 -L165 -0.136963067749054 G155 -A174 -0.143096577774033 E163 -P168 -0.144893223489257 T159 -L171 -0.150143888808508 P164 -Y169 -0.153211105217851 W156 -G162 -0.15622823787585 W152 -K175 -0.156611062384541 P164 -L171 -0.15777016067997 W152 -L171 -0.158315210428249 W156 -E163 -0.17317060956859 G155 -N170 -0.174893452012361 T154 -Q172 -0.17706953754514 T159 -N170 -0.194180711444313 T154 -P168 -0.201569703329124 G155 -Y169 -0.223856929437513 G155 -P167 -0.225073800952848 Y158 -P167 -0.226321417974525 Y158 -P164 -0.236571534651352 V153 -L171 -0.243451869747926 S130 -P135 -0.266614475526751 G157 -P167 -0.267161216963768 G157 -E163 -0.27333203682416 C137 -W152 -0.286466430709202 Y158 -E163 -0.290502632043037 T159 -L165 -0.307833752728889 P167 -E173 -0.309926144683081 T154 -E173 -0.334287288894004 G157 -L171 -0.376773934577804 V153 -A174 -0.429882428819266 Y158 -Q172 -0.451121182313642 P167 -Q172 -0.45708909665356