[Fri Aug 26 17:54:53 2016] >Input file: TMQ9QY73M1D.pdb >TM segments: 196-204_ 225-237_ 273-286 MAIDEN score = -0.0581 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C233 -Y277 1.52737642646572 P196 -R232 0.860905886183778 R232 -N237 0.680378667901555 L236 -Y277 0.669243243033019 T197 -F230 0.552049649021554 T197 -G229 0.381260176353167 G229 -Y277 0.359942824290041 L231 -L236 0.353657192425703 D228 -C233 0.350498983575672 T197 -L231 0.342763216638726 L199 -F230 0.340115226242151 S227 -C233 0.311084245406682 E226 -L231 0.309272399905401 E225 -N284 0.270687341741836 C233 -D279 0.259561044535161 E226 -L234 0.23962197284345 L231 -N237 0.224672880449603 L236 -D279 0.220576749125645 E201 -G229 0.214033337019299 S227 -R232 0.207027804997594 C233 -F282 0.20632970283016 N198 -L231 0.203160067352221 R232 -Y277 0.20158311090827 S227 -L234 0.186025846171514 P196 -D228 0.177685442481931 P196 -C233 0.176866769880573 T197 -C233 0.173727396199344 R200 -S227 0.153773095870164 S203 -E225 0.142416372544704 S235 -S275 0.138926937408534 N237 -E281 0.137823960807612 T197 -S227 0.137552850335246 C233 -G278 0.134492941624787 R200 -R232 0.133155300886174 G278 -M283 0.131977135807114 E201 -S227 0.131325034441562 N237 -D279 0.127361558615716 E225 -F230 0.125524793802235 L231 -L280 0.114931994799846 L236 -S275 0.113547562713421 E225 -S235 0.110984680574313 S235 -E281 0.10141128928875 S203 -C233 0.100771040803056 G229 -L234 0.0999079695890039 S235 -G278 0.0992910753787899 L231 -G278 0.0970404930649833 L231 -I276 0.0928151304334459 N198 -F230 0.0912409518653776 S227 -L236 0.0911698116180935 L234 -G278 0.0908942118249061 T197 -E226 0.0878717036465972 L236 -G278 0.0865971674970112 L234 -D279 0.0826569049904977 T197 -R232 0.0717787995583556 L204 -E225 0.0706791873142455 E226 -L280 0.0706491993762967 E225 -E281 0.0702286737624639 L236 -L274 0.0701595154612509 P196 -S227 0.0701451541011808 L231 -E281 0.0689598960675248 E226 -E281 0.0685542623396609 S227 -S235 0.0672481946071344 S202 -S227 0.0629780285997652 L204 -D228 0.0617152598904047 S203 -L231 0.0606807734790835 D228 -S235 0.0573402051446661 P196 -S202 0.0544517474791428 L199 -S227 0.0532148646543755 N198 -L234 0.0525616175811106 S227 -G278 0.0495484945395765 S235 -L280 0.0488312309339864 E201 -F230 0.044585531068345 S202 -E226 0.0433404026213173 D279 -N284 0.0295872249328319 N198 -S235 0.0291670199827587 N237 -I276 0.0206112623853967 F230 -S235 0.018209351679213 N198 -S203 0.0180139863235889 L204 -L231 0.0171713493901269 R232 -D279 0.0165284178956189 S235 -M283 0.01618979518366 S203 -G229 0.0161225253255775 G229 -G278 0.0104400279441305 G229 -N237 0.00996189533887559 S227 -N237 0.0091182001549337 T197 -N237 0.0081705630881026 N198 -C233 0.00754090640039218 S227 -E281 0.00671197296358317 F230 -G278 0.000767052112160549 R200 -E226 -0.0021609418000077 S203 -E226 -0.00247790497831168 N237 -S275 -0.00302398200246579 L199 -L231 -0.00308586398239541 S203 -L234 -0.00597803694046406 L199 -C233 -0.00830388427555395 C233 -S275 -0.00838372569423826 L236 -I276 -0.00844402931410704 F230 -N237 -0.0114487328220143 P196 -F230 -0.0171926819881931 L204 -C233 -0.0189243282549629 E226 -R232 -0.0207712409243092 R232 -I276 -0.021465799353008 F230 -Y277 -0.0219690881628019 R200 -G229 -0.0224434714790815 L199 -R232 -0.0243905439635217 L204 -G229 -0.0286601078162763 T197 -S203 -0.0299538965524526 N237 -F282 -0.0299833117427717 E281 -Q286 -0.0304713801637413 T197 -S235 -0.0319885798984356 N198 -D228 -0.0325686418451556 E226 -G278 -0.0334967696004145 E225 -L231 -0.0366733155091965 E226 -C233 -0.0387713446883318 T197 -L234 -0.0399088234849705 N237 -L280 -0.0399711971070943 S202 -F230 -0.0409506264588257 N198 -E226 -0.0414221189156572 S202 -L231 -0.0435547370986846 S235 -F282 -0.0440860564110812 S202 -D228 -0.0456029248791523 E226 -Y277 -0.0538018098789581 S203 -R232 -0.0547669013504406 E225 -L280 -0.0587777371377332 S235 -Y277 -0.0592918476290729 E225 -R232 -0.0594123005614611 L204 -F230 -0.061683914654588 E226 -S235 -0.0654782608893956 E201 -D228 -0.0676729799702145 L280 -E285 -0.0705035632092068 D228 -L234 -0.0707139439335895 L280 -Q286 -0.0720312512345327 S202 -R232 -0.0762842130593151 S227 -L280 -0.0770687785701396 S235 -I276 -0.0783882983066864 P196 -S203 -0.078841108104899 D228 -L236 -0.082039984395714 R232 -S275 -0.0828616891299512 F230 -L236 -0.0840116388515861 L231 -D279 -0.0853361404612968 L231 -Y277 -0.0872999834828865 R232 -E281 -0.0888597761827441 D279 -Q286 -0.091942210024374 L234 -M283 -0.0920230406726392 E226 -L236 -0.0961690146637713 R232 -G278 -0.0963973439807819 S227 -Y277 -0.0995510264626347 N198 -L236 -0.102265039149303 T197 -L204 -0.106082343399412 S235 -D279 -0.108339966585455 P196 -L234 -0.110952476000505 E225 -F282 -0.117425882462259 L274 -D279 -0.11793668067328 L234 -E281 -0.118613214273301 L234 -Y277 -0.120852119670264 L236 -F282 -0.129584281862083 L234 -F282 -0.132888918762916 T197 -L236 -0.135586837635613 R200 -L231 -0.1356324006684 E225 -L234 -0.144041496050328 R200 -F230 -0.144153636040042 L234 -I276 -0.144645857318306 R232 -L280 -0.147160041297507 G229 -S235 -0.147428676667634 G229 -L236 -0.149288564976245 R200 -D228 -0.153221915523009 Y277 -F282 -0.153274117674656 S202 -G229 -0.157084982354256 N237 -G278 -0.167748305079118 L204 -S227 -0.183726693091023 L236 -E281 -0.185274412253928 P196 -L231 -0.187177705176201 S203 -F230 -0.191678336918162 L204 -E226 -0.193497094195255 S203 -D228 -0.199837689354575 L234 -L280 -0.203154909809616 P196 -G229 -0.203815082124137 P196 -N237 -0.212591286659976 T197 -S202 -0.220894323695884 P196 -S235 -0.22181874963305 T197 -D228 -0.223833748352166 L199 -D228 -0.227107974982825 D279 -E285 -0.23784154161986 N198 -L204 -0.237872335039485 C233 -I276 -0.270656796772393 N198 -S227 -0.280591255130528 D228 -Y277 -0.285633872463931 P196 -E201 -0.286778775302365 L236 -L280 -0.286874012845894 L199 -G229 -0.291537246602603 L199 -L204 -0.294065389394666 N237 -Y277 -0.295226733140879 N198 -R232 -0.338665047172466 C233 -E281 -0.339159992495804 C233 -L280 -0.432762829801863 S203 -S227 -0.500538822545078 P196 -L236 -0.513382230409856 N198 -G229 -0.59019285099549 E225 -C233 -0.605522818288222