[Fri Aug 26 18:10:07 2016] >Input file: TMQ9TTC0S1D.pdb >TM segments: 521-553 MAIDEN score = -8.1146 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E546 -A551 0.867158469331817 L539 -L549 0.770620332304269 F543 -L549 0.665191999774595 F543 -G548 0.6524206375129 D540 -C550 0.527880966222388 F543 -A552 0.50214924143388 G547 -A552 0.347741676775279 V531 -R536 0.335013079474139 R536 -L549 0.294864340820142 R537 -L542 0.289619652869866 E530 -R536 0.286247281374867 L539 -G547 0.279280924359091 D523 -V531 0.274334961537075 R536 -L541 0.272087857558555 D523 -L528 0.265827735539655 T526 -Q534 0.238719546294449 V532 -R537 0.198584451503427 L541 -G548 0.182885364956082 G538 -C550 0.164190447009063 L544 -L549 0.161466633861148 E522 -E530 0.149212081082526 S527 -V532 0.146257276477028 F543 -C550 0.134373676709561 Q534 -L542 0.117772649169732 L533 -L549 0.116209276194565 L539 -G548 0.0989310442107549 L542 -C550 0.0988257499753704 L539 -L553 0.0952849533032349 E546 -L553 0.0868785054437902 L544 -L553 0.0866143386282658 E522 -L528 0.0862017505510873 L541 -E546 0.0848994878477561 L541 -A551 0.0837222346928499 L542 -L553 0.0820130609484906 S529 -G538 0.080264425683124 E546 -A552 0.0779875875255547 L525 -Q534 0.0775124323518748 E530 -G538 0.0724589005140241 Q534 -L539 0.0668292591940256 S529 -R537 0.0667820058563402 G538 -G548 0.0639147552018473 R536 -L553 0.0628300225191154 R537 -E546 0.0621067706095602 G538 -G547 0.0599257399866477 G538 -A552 0.0575573705909864 L542 -G548 0.0534451781179675 R537 -A552 0.0500699923151937 S527 -N535 0.0460575307868791 Q534 -G548 0.0362473967514063 S524 -V532 0.0357949492385077 L542 -L549 0.0330062566741738 D540 -L553 0.0294044561386047 L521 -S529 0.0293493302447378 R537 -A551 0.0285262599877329 T526 -V531 0.0275751251877363 L533 -G548 0.0211578696216943 L541 -L553 0.0146365423725605 K545 -A552 0.010988119712588 S529 -R536 0.00965522404523877 L539 -E546 0.00255715601338391 G538 -K545 -0.000206166848588873 S524 -E530 -0.000643132753450404 N535 -D540 -0.00132326189674625 G538 -E546 -0.00332176496672187 T526 -N535 -0.00509572017088278 D540 -L549 -0.00638756282132036 E530 -R537 -0.00641623166523542 L542 -A551 -0.00975788547190515 D540 -A551 -0.0116489936114723 L539 -A551 -0.012311185643723 R537 -G547 -0.0183675998033905 L544 -C550 -0.0190861046311728 K545 -L553 -0.0204625982038404 Q534 -L549 -0.0210561787121355 L525 -L533 -0.0242928143927337 V531 -L539 -0.0253601935247776 D523 -S529 -0.0309013305877671 N535 -L549 -0.0314953215994671 D540 -A552 -0.0555011942110859 L533 -L541 -0.0584854842704328 E522 -S527 -0.0640642168149386 Q534 -D540 -0.0705430180813713 L533 -C550 -0.0732905456079456 L541 -C550 -0.0741973922665036 D523 -E530 -0.0758774986758395 V532 -D540 -0.0759420594962306 L541 -A552 -0.0768123587967633 L528 -R537 -0.0776965869179664 E522 -S529 -0.0777940639973703 V532 -L541 -0.0808931775848487 S529 -Q534 -0.0878714402224445 N535 -F543 -0.0899107449140502 Q534 -L541 -0.0963545319273518 D540 -G548 -0.0988305760418082 R537 -G548 -0.101933198611294 R536 -L544 -0.102038709290154 V532 -L549 -0.102322225882094 R536 -A552 -0.104747218355704 R537 -K545 -0.108015759722097 N535 -L544 -0.108380977200834 S527 -R536 -0.109615382565656 E522 -V531 -0.111477582772955 D540 -G547 -0.114834421630491 Q534 -F543 -0.120768991615853 D540 -E546 -0.121068264856665 R537 -L549 -0.122455792029553 L528 -R536 -0.123782221584061 L525 -E530 -0.127880300193855 L533 -L542 -0.127898793365249 L542 -G547 -0.135470661433363 L528 -N535 -0.135498335430882 R536 -A551 -0.138577346929239 N535 -L542 -0.146774518874007 V531 -G538 -0.147070386981978 V531 -R537 -0.154119736077878 L539 -K545 -0.159206059876893 R536 -G547 -0.161523629316953 F543 -L553 -0.16155251243104 E530 -N535 -0.162863861620535 G547 -L553 -0.163602882416104 L521 -E530 -0.163956879960008 E530 -L539 -0.165705629029254 D540 -K545 -0.169989292723726 S524 -L533 -0.172665121157572 N535 -G548 -0.178490865606342 S527 -Q534 -0.180504031473725 R536 -F543 -0.181120756657829 G538 -F543 -0.184957161914093 S524 -V531 -0.185171012209093 L521 -L528 -0.187773086662307 R537 -C550 -0.19158184180461 R537 -F543 -0.19256251859989 L521 -T526 -0.196615747315281 S527 -L533 -0.198349394626832 L525 -V532 -0.200788067370048 V532 -G538 -0.201618560992345 L544 -A551 -0.201949229838084 L542 -A552 -0.206082502524143 R536 -G548 -0.207911040602623 L539 -A552 -0.213670850597286 R537 -L544 -0.214009973342964 T526 -V532 -0.216579634158205 L541 -G547 -0.233240373745666 K545 -C550 -0.235834895055766 V531 -D540 -0.243307755867747 R536 -L542 -0.248608943296244 N535 -L541 -0.248654236270971 L544 -A552 -0.248939472304729 D523 -V532 -0.256325227390712 T526 -L533 -0.266638019609888 G538 -L544 -0.280029952656049 V532 -L539 -0.286418322968558 N535 -C550 -0.294222473200553 G548 -L553 -0.294528069773968 K545 -A551 -0.299155085245157 L528 -L533 -0.301105727861382 L533 -D540 -0.306233402431683 S529 -N535 -0.317297178546819 F543 -A551 -0.320906584373139 G538 -L549 -0.336640689962269 L521 -S527 -0.343552525593256 L533 -L539 -0.363265704842965 L539 -L544 -0.386392045956429 L533 -G538 -0.390773866181056 L541 -L549 -0.401320789656084 L528 -Q534 -0.408141112271281 L525 -V531 -0.408164386832589 L539 -C550 -0.418810453531429 S524 -S529 -0.52277449654974 R536 -C550 -0.605680638548365