[Fri Aug 26 18:13:58 2016] >Input file: TMQ9UKZ4S11D.pdb >TM segments: H661-681 MAIDEN score = -1.6687 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D675H-C681H 0.56376338419569 A676H-C681H 0.367964664054527 H669H-A676H 0.146625848723715 G670H-A676H 0.141750920711655 G670H-G677H 0.113036897793109 C662H-S667H 0.105956793496849 L674H-S680H 0.10199686902283 T671H-G677H 0.0893921964803641 Q663H-G668H 0.0309228043067975 L673H-C681H 0.0208437154848742 F672H-S680H 0.0145312194428402 L673H-S680H 0.00671448123257878 H669H-L674H 0.00247768216923383 T671H-V678H -0.0012659744419885 Q665H-G670H -0.00579205924327653 F672H-C681H -0.00632012012510264 G670H-D675H -0.030771609493522 T671H-C679H -0.0405899713882171 T671H-S680H -0.0415277367581037 D675H-S680H -0.0950123474675086 L674H-C679H -0.109554761264389 E664H-H669H -0.116723373248101 V661H-C666H -0.116909112535024 F672H-C679H -0.141820819083826 F672H-G677H -0.156836817728006 T671H-A676H -0.276356596716093 L674H-C681H -0.352716669273175 F672H-V678H -0.370211422428011 L673H-V678H -0.452244388405509 Q663H-H669H -0.523113452403232 L673H-C679H -0.53694079892539