[Fri Aug 26 18:16:51 2016] >Input file: TMQ9UQF0S1D.pdb >TM segments: A368-400 MAIDEN score = -8.6157 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- D370A-L375A 0.557295858299891 D387A-F399A 0.468295839328142 T390A-F399A 0.461599550962305 R383A-L388A 0.45879798526107 A391A-T396A 0.426179573800232 V378A-R383A 0.410339347877688 R393A-L400A 0.400962435806718 G394A-F399A 0.377960131093085 L389A-T396A 0.363609015089214 V379A-R384A 0.363091419653478 R383A-C397A 0.355953351329612 L386A-G395A 0.346093504094148 D387A-C397A 0.335238225822066 R383A-T396A 0.322575997772928 R384A-L389A 0.300414829984614 A376A-Q381A 0.265627307760267 N382A-C397A 0.258968837134877 Q381A-T396A 0.2397908258231 R383A-A391A 0.231751668135667 L388A-G395A 0.222946439154589 N382A-G395A 0.213208997215326 Q371A-A376A 0.205858426435685 L389A-G395A 0.201967149867055 L389A-C397A 0.162513670249961 R383A-E392A 0.159707177141087 L386A-A391A 0.155253060931825 L388A-C397A 0.15358339955743 R393A-F399A 0.149038839614241 A376A-R384A 0.145419858717326 Q381A-L386A 0.137098655339615 D387A-L398A 0.135926936995129 N373A-N382A 0.134599285656349 D387A-G394A 0.128563111732681 L388A-L400A 0.125706888417726 R383A-G394A 0.114578471041452 L372A-L380A 0.110320658483005 A376A-L386A 0.106772520871202 A385A-G394A 0.104708389028077 N373A-R383A 0.100062586670601 Q371A-L380A 0.0913159190702699 E392A-L398A 0.0845703445279846 L380A-G395A 0.081264844136312 R384A-L398A 0.0777864372417626 Q369A-A377A 0.0744431487436366 T390A-T396A 0.0737461243234954 A376A-A385A 0.0716095283627274 N382A-F399A 0.0704920322413427 L372A-Q381A 0.0639894827325778 V379A-G395A 0.0503914893456014 S374A-V379A 0.0488094941161386 L375A-A385A 0.0482196009017493 A385A-F399A 0.0471243829311692 R384A-F399A 0.0436332779664834 A377A-A385A 0.043132684260649 Q381A-L389A 0.0373878802932763 L368A-N373A 0.0267548631062615 D370A-A377A 0.0247371863978856 L386A-E392A 0.0217841708289457 S374A-N382A 0.016895990016693 L389A-L398A 0.0161661741321684 L380A-C397A 0.0149142144228926 A391A-C397A 0.0144502545080774 R383A-R393A 0.0132711013999045 R383A-F399A 0.0132383795088269 V378A-L388A 0.0120840846068533 R384A-G395A 0.0113456452437286 Q371A-V379A 0.000701058666078058 E392A-L400A 0.000202478677369999 N382A-A391A -0.00139127164550557 Q369A-V378A -0.00537652964294866 V379A-T396A -0.00549760072477579 R384A-G394A -0.00902852531142129 L380A-T396A -0.0113854170407315 Q369A-V379A -0.013362712600739 Q381A-T390A -0.0181109211253689 E392A-F399A -0.0209147483710352 N373A-Q381A -0.0212950791517685 Q381A-A391A -0.0271788033104245 D370A-V379A -0.027216878036028 L388A-F399A -0.0315321746687722 D387A-E392A -0.034514498298444 R384A-R393A -0.0363206396011304 A391A-L398A -0.039717575394147 D370A-V378A -0.0397244619484312 R383A-G395A -0.0407707108457775 R384A-T390A -0.0416650961826264 N382A-L388A -0.0466469068697677 L368A-A376A -0.0488893703486015 R393A-L398A -0.0494115196836269 A385A-C397A -0.05102335087392 N382A-D387A -0.0529694486404702 N382A-T390A -0.0542965151407273 A385A-L400A -0.0545294333530215 A385A-E392A -0.0677482511758002 A385A-R393A -0.0679335362079856 L386A-L398A -0.0698365757031283 R384A-L400A -0.0728579597466383 R383A-L400A -0.0753545269562865 V378A-D387A -0.0755518714555423 Q381A-D387A -0.0855792437201195 D370A-L380A -0.0898969246953829 Q381A-G395A -0.0900212434399381 L386A-T396A -0.0904039289182981 S374A-R383A -0.0949636551844764 D387A-R393A -0.0951591430202412 Q369A-S374A -0.0973924434871192 L368A-A377A -0.100689050029366 L388A-G394A -0.10092693428992 A385A-T396A -0.104168744189388 V379A-L388A -0.104646156010313 L372A-N382A -0.106164054099388 A391A-L400A -0.10787923666304 T390A-L400A -0.108101668323421 V379A-D387A -0.109689935031214 L375A-R383A -0.114883554584897 V379A-C397A -0.118997031773167 L372A-A377A -0.119868925483239 L386A-F399A -0.121868295705044 A377A-L386A -0.126721148915117 Q369A-A376A -0.127434884151906 L388A-R393A -0.129604552397833 R383A-L398A -0.145649132159671 R383A-T390A -0.145758290066688 L388A-L398A -0.147769726282272 N373A-V378A -0.148521754372304 S374A-Q381A -0.151198429512078 L380A-L389A -0.152097034281021 L380A-L388A -0.155272191349111 L386A-G394A -0.155588863021142 L386A-R393A -0.161420705979163 R384A-E392A -0.161546131127668 N382A-T396A -0.162752107228933 V379A-L386A -0.16311198062015 A385A-L398A -0.165582207036591 L375A-R384A -0.166084143190213 Q371A-V378A -0.169126921879132 L388A-T396A -0.169610840256775 V378A-R384A -0.171914734778666 Q381A-C397A -0.17483183532689 A376A-R383A -0.176333839681796 L386A-L400A -0.177478673901366 L386A-C397A -0.179555166994109 R383A-L389A -0.180659866028653 R384A-T396A -0.182716437518636 G394A-L400A -0.190807126769304 L375A-N382A -0.191294445240054 D387A-L400A -0.193277963308926 A377A-R383A -0.194158216476263 V379A-A385A -0.194315440238967 D387A-G395A -0.195017954666548 R384A-A391A -0.195094437683357 N382A-L389A -0.197433495669147 L368A-S374A -0.201870536144011 L368A-L375A -0.207342823365488 D370A-A376A -0.21233309667155 Q371A-A377A -0.213823822895466 L380A-A385A -0.21610008032717 V378A-L386A -0.22245253290806 A385A-G395A -0.222453482474109 A376A-N382A -0.224587806218227 L380A-L386A -0.22779721480466 A377A-N382A -0.228209820943071 L389A-L400A -0.230295965446406 N373A-L380A -0.230906966614076 A385A-A391A -0.233278807460908 S374A-L380A -0.238732295227202 Q381A-L388A -0.239647955835724 A377A-R384A -0.24506001295984 A385A-T390A -0.256471401305451 T390A-G395A -0.271106244130904 L389A-G394A -0.273938520475632 L389A-F399A -0.27971639452403 V378A-A385A -0.288331032324676 N373A-V379A -0.293516043314215 L380A-D387A -0.303239355119796 T390A-C397A -0.310515738785659 T390A-L398A -0.314773971292658 L372A-V379A -0.387420383399655 L372A-V378A -0.399464648838169 G395A-L400A -0.40200964062067 L375A-L380A -0.419229653863129 D387A-T396A -0.425227572883922 A391A-F399A -0.439486054670216 Q369A-L375A -0.479397311762416 L375A-Q381A -0.501890838768066 E392A-C397A -0.603546632926211 R384A-C397A -0.605227871875287