[Mon Aug 29 16:45:14 2016] >Input file: TMQ9WC60S4G.pdb >TM segments: 91-109 MAIDEN score = -3.9520 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K93 -Q99 0.404864729894165 E102 -V107 0.226398151293854 N94 -Q99 0.216952855329163 V97 -E102 0.20438749971578 M100 -D109 0.188481478650935 N94 -D103 0.15359477029468 N94 -E102 0.121932237293413 M96 -E102 0.116631636487964 I104 -D109 0.0947408114735779 M91 -M100 0.0854983017192759 D95 -M100 0.084938999844264 W92 -V97 0.071673634679124 M100 -W108 0.0701903149790546 D98 -S106 0.0650524513927471 Q101 -D109 0.0619027164630863 D98 -I105 0.0317200445659904 W92 -M100 0.0102496779389556 Q101 -W108 0.00382860323572998 Q99 -V107 -0.0168804967030511 M96 -I104 -0.0204836227458776 W92 -D98 -0.0410407293437137 M96 -D103 -0.0437865284548082 D98 -D103 -0.0477396742768246 D95 -I104 -0.0567768205300777 N94 -Q101 -0.0609033405727508 E102 -W108 -0.0670559496780263 W92 -Q99 -0.0675133704137776 D95 -Q101 -0.0733824926303375 Q99 -S106 -0.0829387021528942 W92 -Q101 -0.0838257155585886 D95 -E102 -0.0892128016494717 V97 -S106 -0.0969073990861937 E102 -D109 -0.0971864518607216 Q99 -W108 -0.103466954796233 Q99 -I105 -0.105057580028641 M91 -Q99 -0.107410579687784 M91 -M96 -0.108013481405045 N94 -M100 -0.115190677628933 Q101 -S106 -0.13069073737921 M91 -Q101 -0.132154984154718 D95 -D103 -0.133513064067356 D103 -W108 -0.13776849508922 D98 -I104 -0.142748572647942 K93 -M100 -0.145371155036936 K93 -D98 -0.16866681595935 M91 -D98 -0.177219291650233 V97 -I105 -0.180022280860628 K93 -Q101 -0.180645114969527 V97 -I104 -0.188037157505011 M100 -S106 -0.19218595017221 D98 -V107 -0.202707344579616 D103 -D109 -0.216295738285253 M96 -Q101 -0.228433873640604 Q99 -I104 -0.233082707387388 M91 -V97 -0.234091118421027 V97 -D103 -0.260339868677174 M96 -I105 -0.261389066575731 M100 -V107 -0.268288908482804 M100 -I105 -0.41636708132487 Q101 -V107 -0.450231578025294