[Mon Aug 29 16:51:11 2016] >Input file: TMQ9WTS6S9G.pdb >TM segments: B595-620 MAIDEN score = -1.3583 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C609B-C614B 0.503648214483462 C600B-E611B 0.391386137287128 G603B-C609B 0.323606387749341 C598B-N608B 0.280579396507224 C600B-G606B 0.248908710365625 Y604B-E610B 0.214716635319821 G603B-N608B 0.20994898283189 C600B-E610B 0.209646772253285 Y604B-E611B 0.197153859765058 G603B-A612B 0.157362420199637 S597B-K605B 0.155570445862481 N601B-E607B 0.144017226515064 N601B-E611B 0.109214033201242 S597B-E607B 0.108157087390332 G606B-E611B 0.10205018885974 S602B-A612B 0.100500266994561 S602B-C609B 0.091658421222592 A599B-E607B 0.0759599916835549 C600B-C609B 0.06764020513888 Y604B-A612B 0.0594944542044651 N601B-N608B 0.0509265437014045 D613B-S620B 0.0475297196058424 Y604B-C609B 0.0456343898418705 G596B-G606B 0.039962443645416 K605B-E610B 0.0350269176106996 C598B-G603B 0.0221870352275122 C614B-C619B 0.0172487695903101 A599B-N608B -0.0034039745400361 K605B-E611B -0.0123199551424547 S602B-N608B -0.0201550399599253 S602B-E607B -0.0486590748828531 A612B-P617B -0.0491188014656059 M595B-C600B -0.0555571011992901 S602B-E611B -0.0618030876379498 D613B-G618B -0.0647646070028407 N601B-E610B -0.0681497150740051 E607B-A612B -0.0687456375645197 S597B-Y604B -0.0713903544539727 C600B-N608B -0.0773948040942392 G603B-D613B -0.0866164154833418 C598B-G606B -0.0903765091753357 A599B-K605B -0.110836113936632 S602B-E610B -0.113221188299102 C598B-K605B -0.128359697076977 K605B-A612B -0.140766320868177 E611B-D616B -0.14369319735531 S597B-G606B -0.153581169238185 E610B-L615B -0.160766146171756 N601B-C609B -0.167885255149793 C600B-E607B -0.182082746417271 N601B-G606B -0.183233349451651 C600B-K605B -0.185631695695902 Y604B-D613B -0.213563452530456 A599B-Y604B -0.217328051154365 C598B-Y604B -0.232676295558628 G603B-E610B -0.255389518423214 G603B-E611B -0.261572858010434 D613B-C619B -0.280615994004541 C598B-E607B -0.282529106409843 L615B-S620B -0.295617871776154 A599B-G606B -0.370828112937218 C614B-S620B -0.50938564219991