[Fri Aug 26 16:48:44 2016] >Input file: TMQ9Z138S5D.pdb >TM segments: A452-466_A550-577 MAIDEN score = 1.9579 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L565A-D573A 0.879869914765242 R568A-V574A 0.617259702074133 E563A-H571A 0.596316078845185 G559A-F564A 0.573623126215851 F564A-D573A 0.552624508847301 F564A-S572A 0.463016279449175 L565A-V574A 0.383345144492658 L565A-H571A 0.378153862615013 V566A-V574A 0.369939724777407 K461A-C556A 0.337823299656616 K461A-S554A 0.333444553075963 V566A-S572A 0.32670500997903 K466A-S550A 0.325275929227173 S554A-G559A 0.296548550844755 D560A-L565A 0.270941016426819 F564A-H571A 0.269500755858639 D560A-V566A 0.257542942731881 D560A-D573A 0.242683177679132 A463A-F553A 0.226411228408665 G559A-S572A 0.219779900125452 V566A-D573A 0.218407484958906 H558A-F564A 0.213372109086208 H562A-P570A 0.203486941191641 D560A-H571A 0.200330043645833 H562A-S569A 0.196875875904232 G559A-P570A 0.196332801402308 L561A-V566A 0.194256033065543 H558A-G575A 0.191239979823417 K466A-I552A 0.182234652408655 Y555A-D560A 0.180779347389807 H558A-V574A 0.178276031373758 V566A-G575A 0.160472896110614 S569A-G575A 0.154257803369409 C556A-H562A 0.150047240377094 Q462A-C556A 0.143389751874883 M567A-D573A 0.142206173810682 H558A-V566A 0.138545166413282 Q462A-F553A 0.133785411853033 E563A-V574A 0.129724157319626 H562A-V574A 0.127042901902424 G559A-V566A 0.113643368864843 M452A-I457A 0.10149341051049 A463A-Y555A 0.085953533016579 S572A-T577A 0.0844255274738756 F564A-G575A 0.0831132169056765 E563A-R568A 0.0828809808824795 S569A-T577A 0.0827548559245362 L465A-M551A 0.0760490709469615 S557A-H562A 0.0759509553157063 S557A-H571A 0.0688336183678008 V566A-S576A 0.0683924027152347 F553A-D560A 0.0672361219143207 V566A-H571A 0.0624674236144234 K464A-C556A 0.0621984325030569 S569A-V574A 0.0586067605519478 M567A-G575A 0.0565133367589641 L561A-V574A 0.0559093139684528 F564A-S576A 0.0530731966778379 R568A-T577A 0.05093867202166 G559A-V574A 0.0503311436871245 S554A-D560A 0.0492981791194942 F553A-H558A 0.0486079295788233 M567A-T577A 0.0439125307652558 Q462A-S557A 0.033835387874654 L561A-P570A 0.0329131612119937 L565A-S576A 0.02832348192253 H571A-S576A 0.0248464887119533 C556A-F564A 0.0203709580204929 Y555A-F564A 0.0194711184039598 S557A-S572A 0.0182549804677765 R568A-S576A 0.0165899160122169 L465A-Y555A 0.0110025940581888 L561A-G575A 0.00684201539143636 Q462A-Y555A 0.0053500729029814 D560A-S572A 0.00383925720431 V566A-T577A -0.000311829889348303 L561A-D573A -0.0109141542238738 P570A-G575A -0.0109194756293784 A463A-I552A -0.0138295664683166 R568A-D573A -0.0139486825736641 E453A-S458A -0.0168229873374794 L561A-M567A -0.0175566573805632 K466A-S554A -0.017592149142783 A463A-C556A -0.0176717240576374 C556A-L565A -0.0226137042007393 H562A-H571A -0.0274830552636516 I552A-S557A -0.0277738185942722 K464A-F553A -0.0295936210630154 F553A-G559A -0.0297189967886924 D560A-P570A -0.0342382590450239 A463A-S554A -0.0355564350405224 S569A-S576A -0.0534785484793079 Q462A-S554A -0.0573995756747063 E563A-S572A -0.0580108839791462 L456A-K461A -0.0603920378292022 S557A-E563A -0.0606415413228172 S550A-Y555A -0.061255597731515 L561A-R568A -0.0632845974571083 P570A-T577A -0.0635238909717006 M454A-Q459A -0.0643112487459772 E563A-G575A -0.0644054727947725 S557A-F564A -0.0663849350060209 G559A-D573A -0.0765903781521904 E563A-S569A -0.0778846384565235 M567A-S572A -0.0788507111068784 K466A-Y555A -0.0810276540467036 F564A-S569A -0.0879236315049359 E563A-D573A -0.092719120583183 M551A-C556A -0.0954482896147866 K464A-Y555A -0.112111328399756 S557A-L565A -0.118584443695852 L565A-P570A -0.12325221116407 M567A-S576A -0.123780047040326 L565A-G575A -0.138195334918079 K461A-Y555A -0.139150443949075 Y555A-L561A -0.143453875367246 L561A-H571A -0.147452687641942 K464A-M551A -0.147663832029332 H558A-S572A -0.150486512218272 L465A-S554A -0.150748681338669 P570A-S576A -0.150808515296132 G559A-L565A -0.151200750273993 L565A-S572A -0.152778985960541 L561A-S569A -0.161070415364306 F564A-P570A -0.165346426882683 K466A-M551A -0.173414535746043 E563A-P570A -0.179569124057349 G559A-H571A -0.191276702333943 H562A-R568A -0.199863366356247 K466A-F553A -0.205095595636785 R568A-G575A -0.208654006506767 H558A-E563A -0.217679995350753 H558A-L565A -0.218501341925684 H558A-D573A -0.239898151846403 K464A-S554A -0.240135332847566 D560A-V574A -0.2590050819895 K464A-I552A -0.263968366225094 P455A-H460A -0.269274715752054 L465A-F553A -0.271141462435909 H558A-P570A -0.286354437051197 H562A-D573A -0.295100197542998 F564A-V574A -0.305983309245621 H562A-S572A -0.309398663331493 H562A-M567A -0.319472566807536 M567A-V574A -0.32110711995385 L561A-S572A -0.326608852061081 L465A-I552A -0.329084625148477 C556A-L561A -0.444752697756011 C556A-E563A -0.537040864613584 H558A-H571A -0.723675212866166