[Mon Aug 29 17:11:07 2016] >Input file: TMR4MGX2M1G.pdb >TM segments: 387-424_ 517-524_ 529-535 MAIDEN score = 18.7396 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L521 -C532 10 Q519 -P534 10 V520 -C532 1.4669641461964 L523 -T529 1.35509796809166 L522 -T529 0.84762285624587 L521 -F531 0.775994744278798 S387 -I392 0.691455661479797 L522 -F531 0.672810535397694 L522 -C532 0.662621496503861 D518 -P535 0.58810012479451 L523 -F531 0.521030008061218 H402 -A410 0.425846386915202 V401 -V407 0.382008099188948 C517 -P535 0.366049886737228 L521 -T529 0.359023653955441 L521 -A530 0.35289929937202 Q404 -H409 0.350504232724114 C517 -C532 0.340567657319779 G393 -Y413 0.302399498306138 C517 -P534 0.30193911543696 A415 -D422 0.295917689295045 G393 -A415 0.291874817531061 D399 -V407 0.269231044035888 D399 -M412 0.245693170847021 R389 -M394 0.237701725433741 L419 -T424 0.234189140622675 Y413 -R418 0.224760569430293 L523 -A530 0.206629712883878 S387 -P396 0.206327859579484 M412 -L419 0.202428908513584 D399 -A410 0.187809873904989 K408 -E416 0.1866825441246 G403 -L411 0.179129356022812 G393 -L417 0.178432000593743 L521 -G533 0.17640357275847 R391 -P420 0.175793737381805 K408 -Y413 0.175439690299577 G403 -A414 0.166856100448576 G393 -A410 0.161508437373232 R391 -E416 0.159440441998315 R389 -E416 0.158269766960685 E416 -D422 0.158246205449031 R391 -A415 0.150777277414862 T406 -L411 0.150740663799309 L522 -A530 0.148274614202375 L417 -T424 0.142543459830426 G403 -K408 0.140787037392713 L522 -P534 0.132753374451626 V395 -Y413 0.124959990926355 C517 -F531 0.123081774020413 A414 -P420 0.123053569433132 V520 -P535 0.121934668920976 H409 -T423 0.121208729413324 M394 -V401 0.120271719171021 R391 -A414 0.110868780726954 M394 -L411 0.105175728807914 S390 -A414 0.103875466794773 T406 -A414 0.100712178167819 H402 -M412 0.0999878552263045 P396 -A414 0.099656305989536 D399 -H409 0.0983507154231829 L388 -A415 0.0982125998834075 H402 -A415 0.0968400198630075 R389 -R418 0.0946882714321097 V400 -H409 0.0888593630207852 L388 -V395 0.0843305241386734 L411 -E416 0.0836592235889806 V395 -A410 0.0831834424042226 L388 -A414 0.0812117719208363 R391 -R418 0.0804192597504723 A524 -C532 0.0787074578835187 R389 -P420 0.0764610626782383 Q404 -Y413 0.0760293088061079 V395 -A415 0.0742605458414562 P396 -L411 0.0736678210694768 R418 -T423 0.0723465712505335 H402 -A414 0.071657851808089 L405 -E416 0.0694035356759124 G403 -Y413 0.0691615303898869 M394 -Y413 0.0687547977786267 A414 -D422 0.0661954171776129 M394 -L417 0.0623570844393573 G393 -L411 0.0623259313180959 Y413 -P420 0.0603551242989016 V407 -A414 0.0596576184048256 L523 -G533 0.0562508937635717 V395 -A414 0.0554732869720871 Y413 -P421 0.0524993907384612 G393 -V401 0.0517368058028325 R391 -L417 0.0477893893785848 H402 -E416 0.0453829467675285 D399 -L411 0.0441555064479378 G393 -M412 0.0440862177831738 M394 -A410 0.042770392069635 L405 -L417 0.0419608279223578 K408 -T423 0.0416289795699372 V520 -F531 0.0374849458926825 T406 -E416 0.0362539700603532 K408 -T424 0.0353251665723615 R389 -L417 0.0346501275698956 L411 -R418 0.0322897801701654 A410 -L417 0.0309684042808414 T406 -A415 0.0305063550507523 L405 -A415 0.0259157070302729 M394 -A415 0.023204696781118 P396 -V401 0.0222129489457901 A524 -A530 0.0220626757940998 H409 -L417 0.0209825360449309 V395 -M412 0.0209131639282027 L405 -A410 0.0192160827408578 H402 -V407 0.0189459521884108 M394 -A414 0.0144405569308237 I392 -L417 0.0136030805314462 A410 -T423 0.0134386237823341 V400 -K408 0.0115207669308077 H409 -R418 0.0104025440090461 L388 -E416 0.00909019872840844 A414 -P421 0.00799712481328108 Q519 -T529 0.00717655763701064 L417 -T423 0.00636608435190666 A524 -G533 0.00292139246331313 H402 -L417 0.000732231505357284 Q519 -P535 0.000407531294374763 G393 -L419 0.000255651714761163 S387 -L419 -0.000835262089901513 D518 -F531 -0.00143846336292963 I392 -R418 -0.00178712307144391 D518 -G533 -0.00195235079819422 V400 -V407 -0.00276669741592661 H409 -A414 -0.00495560000830153 C517 -L523 -0.00559223642866347 G393 -R418 -0.0056941443993308 S387 -V395 -0.00660614131933412 V400 -M412 -0.00742294932631582 M412 -P421 -0.00767293584107498 A415 -T423 -0.00931068845311911 C517 -L522 -0.00984534832519124 I392 -A415 -0.0150481026612801 G393 -E416 -0.0165828779875086 V520 -P534 -0.0198847200770142 D399 -T406 -0.0199424196847864 L388 -L419 -0.0248458315230476 M412 -T423 -0.027452471011538 I392 -A414 -0.0286147318715386 V400 -L417 -0.0309931709195306 V401 -A410 -0.0334469507886197 V400 -A415 -0.0338533031902304 L405 -Y413 -0.0363064135712357 K408 -A415 -0.0374837048484313 V407 -A415 -0.039013491806251 V401 -H409 -0.0396767589636999 Q519 -A530 -0.0399006562807247 S390 -V395 -0.0435123866307467 Q404 -L411 -0.0457569261548021 Y413 -D422 -0.0466829745433022 V401 -A415 -0.047144540161915 S387 -R418 -0.0477334806497238 A524 -T529 -0.0503672536900548 A414 -T424 -0.0522442687422098 R389 -L419 -0.0551964751615639 D399 -Y413 -0.0555420387617205 L388 -P420 -0.0555998301007312 Q404 -A410 -0.0574653892702763 L523 -P534 -0.0579258792661612 Q404 -A414 -0.0580279095865164 V401 -A414 -0.0581565395292465 S387 -L417 -0.0600878475382678 L411 -T423 -0.0603819021314509 G393 -V400 -0.0641669525039159 S387 -A414 -0.0643997574775632 S390 -R418 -0.0671613084952076 A530 -P535 -0.0700161740829885 V407 -E416 -0.070750408048796 M412 -P420 -0.0715886593503723 V400 -T406 -0.0739432915584162 T529 -P534 -0.0747435037773441 D399 -Q404 -0.0816038447736708 V401 -M412 -0.0823748976003795 E416 -T424 -0.0824603131877488 H409 -E416 -0.0824759655006817 V400 -E416 -0.083762210492671 A414 -T423 -0.0838692056221625 D399 -A414 -0.0841471578138922 D399 -L405 -0.0852591453067688 L405 -A414 -0.0854018361517266 V401 -E416 -0.0857181379616745 L411 -T424 -0.0882522235378485 T406 -Y413 -0.0894185645037484 Q519 -G533 -0.0943976532153412 Y413 -T423 -0.0944454402602847 Y413 -T424 -0.0962869967266511 Y413 -L419 -0.0988613651924111 S387 -G393 -0.0996007213220479 A524 -F531 -0.100472007495567 R389 -A414 -0.101405992393144 D518 -P534 -0.103236875202373 R391 -L419 -0.103416731462365 R389 -A415 -0.105855396286133 M412 -R418 -0.10872607676294 Q519 -C532 -0.110504758512192 G393 -D398 -0.112119772201079 A415 -P421 -0.112915264457886 H409 -T424 -0.113582334629367 G393 -D399 -0.114086405143539 Q404 -M412 -0.114610672745203 G403 -A410 -0.115161710896146 V395 -V400 -0.119716935089917 V401 -T406 -0.120231765507828 H402 -H409 -0.123459714930097 E416 -T423 -0.126346195141978 V520 -A530 -0.127645967029077 D398 -G403 -0.130344961939382 R418 -T424 -0.13337719008546 V395 -L411 -0.135305940105013 L523 -P535 -0.136247346303421 H409 -A415 -0.143969796396616 V520 -T529 -0.145154522869619 A410 -R418 -0.146190378355041 D398 -A410 -0.146896893544722 A415 -P420 -0.14838895620111 E416 -P421 -0.148873329618021 M412 -D422 -0.152616372805292 S390 -L419 -0.157475225636938 L411 -L417 -0.159424228754343 A415 -T424 -0.162619336092941 L388 -Y413 -0.170295181174355 S387 -M394 -0.173198890201704 V407 -M412 -0.174198326424614 G393 -A414 -0.179325603853503 S390 -L417 -0.180498384159511 K408 -A414 -0.182000272170791 G403 -H409 -0.198360957176297 V395 -V401 -0.204589317733269 C517 -G533 -0.213659059114309 M394 -D399 -0.224298842039826 G403 -M412 -0.226123085813618 V401 -K408 -0.230738766426861 A410 -A415 -0.231163753562317 L523 -C532 -0.235389639500877 Q519 -F531 -0.236326887240199 V395 -H402 -0.239583104537481 A414 -L419 -0.240273713191705 M394 -V400 -0.242999032442655 H402 -K408 -0.244024688245278 L522 -P535 -0.259374123822907 V401 -L411 -0.269507015379812 L521 -P534 -0.270067642315312 V400 -L405 -0.270145731008117 V400 -A414 -0.270211311323413 L388 -R418 -0.271082972892225 A410 -E416 -0.272259864772454 L522 -G533 -0.273575307572706 H402 -L411 -0.279490239594194 L388 -M394 -0.280836787068595 L521 -P535 -0.284226094158012 P396 -H402 -0.288110232998681 M394 -M412 -0.290350083118215 L417 -D422 -0.297038762165402 M394 -R418 -0.301666293537319 D518 -C532 -0.302743895732245 M412 -L417 -0.309534711287 V401 -Y413 -0.310798972628938 T406 -M412 -0.316305917286113 V400 -L411 -0.318732313273705 M412 -T424 -0.321211955995004 L405 -L411 -0.343038942195083 Q397 -H402 -0.351253085216285 V400 -Y413 -0.355903999785587 L388 -L417 -0.367183262975939 V407 -Y413 -0.386547435263218 L388 -G393 -0.421759051955706 H402 -Y413 -0.43312037799903 V400 -A410 -0.465940326236879 L405 -M412 -0.479148175584844 V520 -G533 -0.502426060808191