[Fri Aug 26 17:14:22 2016] >Input file: TMR5EDN8M1D.pdb >TM segments: 551-567_ 578-599 MAIDEN score = 23.2014 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V587 -K595 10 R561 -P567 10 F586 -I596 1.22586191443387 L559 -K566 1.08679041360633 F562 -I581 1.0622867275246 F562 -P567 1.04947511301352 D563 -V584 0.938970166367074 V587 -I596 0.876967100840345 R561 -V584 0.870804888531092 K551 -L557 0.821481729032095 F562 -V584 0.763357239197923 F586 -K597 0.624694607675334 F564 -G583 0.623752849212621 F562 -V582 0.62200979509544 V587 -E592 0.600852955723155 P585 -G598 0.592409656038954 V584 -K597 0.560037555868879 P585 -I596 0.445699665666591 I560 -P567 0.369362808329346 R561 -V582 0.363944513094029 A580 -K597 0.346842440243042 P585 -K597 0.34358419727314 R561 -P585 0.308521828810095 G583 -S599 0.29700579774533 A588 -I596 0.284017706255521 T565 -P585 0.283430213327149 L589 -G594 0.240988747144827 R561 -K597 0.231041886809499 V584 -S599 0.221054525820225 K555 -D591 0.219366722419163 V584 -G598 0.217247959886418 R561 -K595 0.207727468482196 L559 -P585 0.204138168684447 D556 -D591 0.202336249025083 I581 -K595 0.201920694739579 F586 -K595 0.19797915181811 K555 -I590 0.19569307601611 K578 -E592 0.186549777701552 V587 -K593 0.182470255341462 D563 -K578 0.181058169004126 K551 -L589 0.18053700803964 K551 -F586 0.172032297896797 L589 -K595 0.169132756361746 D563 -K597 0.16619635831192 L559 -G583 0.159009063186612 K578 -D591 0.157808717944276 R561 -G583 0.151996756936523 P567 -L579 0.14894403363593 F562 -K597 0.140123573817076 V584 -I596 0.140092856130534 F586 -S599 0.136678752635271 T554 -K593 0.134636214496308 I560 -K578 0.133654524738312 K558 -D591 0.131368560225353 R561 -I581 0.127301503543013 P567 -P585 0.127012093874742 K566 -V582 0.125671775047506 P567 -A580 0.125363014940382 R561 -A588 0.124893384948036 D563 -A580 0.124772330551819 L579 -P585 0.116763955719387 V587 -K597 0.112438401457025 D556 -K593 0.111290167576318 L559 -L589 0.108407369813048 F586 -G594 0.106397544293663 L579 -G594 0.1008752921723 F562 -V587 0.098265619366221 K578 -V587 0.0976060167915889 A580 -V587 0.0928935697559478 L559 -I581 0.0923551930764805 F562 -L579 0.0890477265474439 D563 -I581 0.0886370672379835 T565 -I581 0.0877322035570671 G583 -K595 0.085779595650068 L579 -K593 0.0851250932396939 T554 -A588 0.0835814616457693 I560 -I596 0.083437485565641 L579 -V584 0.08192713776991 L579 -E592 0.0818806058873331 V582 -S599 0.0784146173678675 K555 -K593 0.0742374787517139 A588 -G598 0.0736978576635301 V582 -G594 0.0718214430335802 F586 -D591 0.0704184842164173 A580 -G594 0.069912544514291 F586 -K593 0.0698289576294624 P567 -V584 0.0686999109351893 A580 -E592 0.0684217716087812 K551 -D556 0.0665249658410991 F586 -E592 0.0660221636282685 P567 -V587 0.063301652933756 D563 -L579 0.061791089768457 K551 -V587 0.0613811389167922 I581 -E592 0.0603243892470631 T565 -F586 0.0601820773408641 V587 -G598 0.0574533436180769 L579 -I596 0.0574160271936877 L579 -D591 0.0566247372848938 I581 -G594 0.0554388203972024 F564 -F586 0.054332304982561 I581 -L589 0.0519432853140485 R561 -K566 0.0497595219623883 G583 -I596 0.0466900524975815 T554 -L589 0.043645806638553 L579 -A588 0.041113019608678 K558 -T565 0.0392315970507576 L579 -I590 0.0384726546618284 L557 -P585 0.0344095466747376 V587 -S599 0.033421705870893 D556 -I590 0.0332023459045314 A580 -P585 0.0301545292767749 T554 -D591 0.0296137835467345 L559 -F564 0.0272723594493764 K555 -V587 0.0233346969038891 F562 -K595 0.020220967372097 K551 -P585 0.0169204953473101 K555 -F586 0.0163961292423194 K578 -G583 0.0157787044336914 K558 -V584 0.015315231285177 L579 -L589 0.0150139040678043 E552 -K558 0.0132305798978418 R561 -G598 0.0109906477052402 K555 -L589 0.00988343722767393 I581 -K593 0.00803902265946421 A588 -S599 0.00751413678125612 K558 -I590 0.00733417627175914 I560 -T565 0.00660745774951654 E592 -K597 0.0057530223232638 I581 -G598 0.0041992219861875 V582 -K597 0.0039572158630552 I581 -K597 0.00244045442645024 G594 -S599 -0.00229828639927909 K558 -I581 -0.00315249273801488 K555 -E592 -0.00344772396913995 K551 -I590 -0.00382910949800497 I581 -F586 -0.00685417193605886 E552 -I590 -0.00759465464175568 K558 -K566 -0.00935891509686826 T565 -V582 -0.0115697266214019 K558 -A588 -0.0118165500898808 A580 -I596 -0.0145388497533562 K566 -I581 -0.0184667345834502 L559 -V584 -0.0191126963534369 F562 -P585 -0.0226717688514326 I560 -A580 -0.023254540788419 V587 -G594 -0.024162721347182 L559 -V582 -0.0254974999875239 K566 -V587 -0.0270982462698397 D563 -G598 -0.027101843875714 P567 -G583 -0.0290206588988857 K566 -G583 -0.0292785905155628 K558 -E592 -0.030768543665292 D591 -I596 -0.0332368468148891 F562 -I596 -0.0355005077121575 F586 -G598 -0.0363335129615221 L557 -A588 -0.0386064610660253 E552 -L557 -0.0389754136751286 V582 -A588 -0.0415262634996996 P585 -G594 -0.0450681103254105 I581 -I596 -0.0458150262940382 L559 -K595 -0.046262616670098 K566 -F586 -0.0475225673757986 I560 -A588 -0.0478615051170106 L589 -I596 -0.0483714696228766 A580 -A588 -0.0504356457578741 L557 -V584 -0.0514901995488426 A553 -A588 -0.0529283770531532 E552 -A588 -0.0537995334887544 T554 -V587 -0.0612253091660335 F562 -G598 -0.0623445358302659 I581 -A588 -0.0628781611345115 F562 -S599 -0.0639126585169738 P567 -V582 -0.065015987561412 K555 -G594 -0.0674981937633374 F564 -I581 -0.0696880350726325 K558 -I596 -0.0701332873388019 K551 -I596 -0.0717771294173359 D556 -V587 -0.0730694934931408 I590 -K595 -0.0739577898995796 K566 -L579 -0.0784918390151406 F562 -A588 -0.0802619016213928 I581 -S599 -0.0813692762596501 L557 -I596 -0.0820483420759421 I560 -L579 -0.0821384433021324 A580 -L589 -0.0824814567604033 A588 -G594 -0.0852228931954517 K555 -A588 -0.0859548148558269 L579 -V587 -0.0874218128478681 R561 -I596 -0.0878971419808368 F564 -P585 -0.0916393172363477 V584 -G594 -0.0932616774473125 L557 -I590 -0.0961665277810495 I560 -K595 -0.0968207573548314 K578 -A588 -0.100829267992132 L557 -K593 -0.101219233987599 A580 -F586 -0.102238729778946 I560 -L589 -0.102482494589936 I560 -I581 -0.102935769717852 L559 -A588 -0.107536115065918 R561 -S599 -0.110227780440552 E552 -L559 -0.110291003518436 L557 -E592 -0.110291003518436 K566 -A580 -0.110695794213324 F562 -A580 -0.111597965823284 K558 -K595 -0.112806397997332 L579 -K597 -0.114135345494357 L559 -P567 -0.116392554840403 K566 -V584 -0.119603438144284 F562 -F586 -0.124271355727132 V582 -G598 -0.127343508198477 K558 -V587 -0.131214853465446 R561 -K578 -0.133559908491323 P567 -K578 -0.134202153132235 P567 -F586 -0.134340860669451 L559 -F586 -0.134429879578107 I560 -V582 -0.135006159155491 R561 -L589 -0.135019855023239 K551 -K558 -0.141236916267254 D556 -A588 -0.142969655539451 E552 -L589 -0.143590951645742 K558 -P585 -0.145990033666877 R561 -F586 -0.146036722893369 A580 -K595 -0.147149794016159 I590 -I596 -0.150534018283089 A553 -I590 -0.152346124229947 K558 -P567 -0.154860899557788 D563 -F586 -0.155552333157287 A588 -K595 -0.159134603194651 K566 -P585 -0.159502204779739 L579 -F586 -0.161405941902961 A553 -K558 -0.162425366095702 L559 -L579 -0.163422200621021 D556 -F586 -0.163552402336189 K558 -L579 -0.165705160123895 R561 -V587 -0.16945435827353 I560 -V584 -0.172853352553652 I560 -P585 -0.172857385397559 L589 -K597 -0.174807446347548 G583 -G598 -0.177208387638387 F564 -A580 -0.178201565629975 L557 -D591 -0.178625860668087 L557 -F586 -0.182781288007085 K558 -F586 -0.185763644486672 T565 -G583 -0.194079311971028 L559 -T565 -0.195779819187948 D563 -V587 -0.199056395586362 V582 -I596 -0.20124444455237 F564 -V584 -0.201779570472283 D563 -G583 -0.202919261231509 P585 -S599 -0.208086726269384 L579 -K595 -0.209394006711637 L557 -L589 -0.209749269206898 K578 -K595 -0.210140224452549 P567 -I581 -0.214119919796874 F562 -K578 -0.216803650113656 G583 -K597 -0.217369010584926 L557 -K566 -0.219338989546133 T554 -I590 -0.220833387070433 L559 -V587 -0.22417910648524 L557 -K595 -0.22961534466111 V584 -K595 -0.23040235536414 F564 -V582 -0.230987843725735 K578 -L589 -0.237207442294371 K551 -L559 -0.237216676572941 I560 -F586 -0.237473647436801 K558 -L589 -0.239666995868819 V582 -K595 -0.246211031696491 R561 -A580 -0.251860504969951 K551 -K593 -0.261672917677859 T565 -V584 -0.269643495913774 D556 -L589 -0.271735505894211 I560 -G583 -0.275934302976682 P585 -K595 -0.277454188642022 A588 -K597 -0.279397955890081 K555 -K595 -0.281085339437031 R561 -L579 -0.284361572667721 K551 -K595 -0.323863989139804 V582 -V587 -0.342735901428094 I560 -V587 -0.344891980249624 I560 -K566 -0.34497877225343 F562 -G583 -0.345779714752275 I581 -V587 -0.35077218547039 K551 -A588 -0.356943136892871 A588 -K593 -0.368995040991802 L557 -V587 -0.370304620768715 D563 -P585 -0.4184171029656 D563 -V582 -0.497636132822057