[Fri Aug 26 17:21:42 2016] >Input file: TMS4IPT0M1D.pdb >TM segments: 364-416 MAIDEN score = -11.3855 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A387 -K392 0.913405075712221 L374 -R414 0.590731570384176 L374 -F413 0.511241437880929 L409 -R414 0.483931814445818 P381 -Q407 0.469019771490145 L388 -A393 0.457645364628677 Q378 -K415 0.453090244803693 Q407 -K415 0.447253197068564 N386 -I391 0.439180846427634 L388 -R396 0.428439128593292 K373 -N380 0.406120718786983 H382 -S410 0.397833175326331 I391 -R396 0.375180176904246 E371 -F412 0.340466451733253 A377 -A402 0.337823595440451 K364 -K373 0.295788407788901 L374 -L409 0.294987440231206 Q378 -V406 0.289047193354932 P381 -E400 0.276433878826245 E371 -N416 0.269372252951532 E371 -N380 0.268506807901577 A377 -R414 0.263603129566508 L375 -T411 0.241908304287717 P381 -S403 0.241635611097816 Q378 -F412 0.239965521173964 S399 -Q407 0.223118282220803 Q369 -Q378 0.215364159133207 L375 -N380 0.201563161008146 N386 -R396 0.199233371448209 H376 -L409 0.197425642106709 N389 -E400 0.193532296341848 P381 -Q401 0.193021226154419 Q407 -F412 0.185252354956971 K364 -L374 0.185011549139473 Q378 -S410 0.18501072439909 L375 -K415 0.184123553097204 L388 -V394 0.184023510560067 L374 -P381 0.182538478330553 D398 -V406 0.179412817747675 P381 -V406 0.17584747317983 K392 -S399 0.175823060116636 P381 -L409 0.174782694621909 E400 -Y408 0.174115470375364 L384 -S399 0.172015558601178 E371 -R414 0.170176824107673 F385 -Q407 0.160621574388576 F385 -K392 0.156311919468568 K373 -Q407 0.152778735258452 P381 -R396 0.15233062431371 R396 -Q401 0.150729641184397 V394 -E400 0.149558857327027 A365 -S370 0.147070495774615 T368 -H376 0.146215846751078 H382 -A402 0.141859534005465 E371 -K415 0.140720398957066 Q404 -F412 0.139113116666064 K364 -E371 0.139012835154642 L384 -K392 0.13562546757329 H382 -Q404 0.13406469729314 A393 -D398 0.133729762089991 K364 -H376 0.131764581782675 N386 -E400 0.129711073146717 N380 -E400 0.126831133963233 L384 -V406 0.124784450288341 I372 -Q378 0.122792996549501 E371 -T411 0.122571881692084 R397 -Q404 0.121901638608771 K373 -Q378 0.119064935085728 H376 -F412 0.118569636242323 L384 -Q404 0.118202554449327 V379 -S403 0.11745082034518 S370 -L409 0.115615326829922 N380 -S399 0.114705183089477 L374 -A402 0.109256240222349 A387 -R397 0.105642729547269 N386 -A393 0.105521631882926 A377 -F412 0.10322091839906 Q401 -S410 0.102553664904944 K392 -D398 0.102011485748615 L366 -L374 0.101819774178543 Y408 -N416 0.0997118651796294 N386 -K392 0.0992679456770618 N386 -S399 0.0983140502424331 T390 -R396 0.0961652418133161 Q369 -S410 0.0951983806669223 L388 -D398 0.094506310682879 L384 -L405 0.0928274769816269 V379 -L409 0.0920195646515145 A402 -L409 0.0914833455523514 E371 -Q378 0.0898713137778109 L375 -L405 0.0898610984397297 Q378 -F413 0.0888441629003616 S370 -Q378 0.0883155477205984 T368 -F413 0.0880885345161477 L388 -Q401 0.0871865538238019 S403 -T411 0.0857195046649557 S370 -T411 0.0856616595633983 L375 -V406 0.0849937357083888 T390 -S399 0.0841161887682614 L384 -Q407 0.0838838029301421 Q404 -L409 0.0819985449010296 R397 -L405 0.0812588030984664 N380 -L409 0.0799767504246178 S403 -Y408 0.079848690657915 P381 -L388 0.0776356225437773 H376 -A402 0.0766301045283191 Q369 -F413 0.0755953851191684 H382 -E400 0.0755716894192831 A387 -S403 0.0754600162613315 S370 -R414 0.0750762321007265 Q378 -Y408 0.074853359086995 H376 -T411 0.074775927356959 H376 -S403 0.0732872132925234 H382 -S399 0.0732146612674582 Q369 -R414 0.0710727632202521 V406 -R414 0.0687192270673744 F385 -L405 0.0681406465991925 Q369 -L374 0.0677514525522007 I372 -N380 0.0661200453143334 P381 -N386 0.0660539730389322 Q369 -A377 0.0643982811883376 K392 -R397 0.0637775501799567 F383 -A402 0.0634911424795055 F385 -E400 0.0628187034420513 L388 -A402 0.0621210850139318 V394 -Q401 0.0595494212394341 V394 -S399 0.0589802531940817 A377 -Q407 0.0577819239657131 I395 -A402 0.0564196748595354 V379 -Q407 0.0562297088768622 Q407 -R414 0.0552635711668752 L374 -T411 0.0551210469618155 I372 -S410 0.0544592329984304 A365 -K373 0.0543105420024474 N386 -S403 0.0531848554550005 L366 -E371 0.050315540343842 F383 -I391 0.0479143838674929 I372 -H382 0.0472002697994719 N389 -V394 0.0467679604539644 H376 -F385 0.0462035367295908 A387 -A402 0.0458593115216726 K373 -F412 0.0458038788133717 L374 -H382 0.0452525734101227 N389 -S399 0.0451407264556121 L384 -A393 0.0419910094475231 K373 -T411 0.0410142084362688 T368 -Q378 0.0397844562788095 H376 -F413 0.0389618172071935 L374 -Q404 0.038756140916381 F385 -Q404 0.0373117324492697 L375 -L384 0.0363405955283493 L384 -R397 0.0359508325869191 V379 -L384 0.0354969841372217 L388 -S403 0.0353289712534053 H382 -L388 0.0334670564019939 Q378 -F385 0.0329893204319562 N380 -N386 0.0326777796501579 T368 -S410 0.0298814724238614 H376 -L384 0.0280096205386053 H376 -Q407 0.0271031831568731 T368 -A377 0.0267418532711439 A402 -Q407 0.0267201932036674 E371 -F413 0.0262947200246542 L384 -S403 0.0257721480164061 F383 -L388 0.0244857633454296 E371 -V379 0.0243144741519087 L375 -Q407 0.0225522671499947 L384 -D398 0.0224934646110313 A402 -S410 0.0220209715081596 F383 -T390 0.0218789275894027 A377 -S399 0.0214613076158905 N386 -A402 0.0189574950602838 V379 -A387 0.0188409777372307 N380 -S410 0.0165905656414913 V406 -T411 0.0152712246459732 E400 -Q407 0.0146348096093973 A377 -L409 0.0135439386284126 S370 -F412 0.0133882774117547 Q378 -R414 0.012352990224004 L405 -F413 0.0119289651204877 F383 -S399 0.0119151536244171 N389 -R397 0.0109883437192062 F385 -R396 0.0106105294979831 F385 -D398 0.00891486377518103 L367 -R414 0.00834237162277418 V379 -Q404 0.00815894904359343 L375 -F383 0.00735993492232012 K392 -E400 0.00728718065535894 I372 -T411 0.00714770379510998 A377 -Q404 0.00642992896454508 F385 -V406 0.00637203206520287 A393 -S399 0.00546760948543934 N380 -T411 0.00381936713502906 Q378 -A402 0.00344905337346368 I372 -F413 0.00319342125076272 I372 -R414 0.00149822305604186 L367 -F413 0.000537254914648955 L375 -S403 -0.000806715402513081 N380 -Q407 -0.00104732896061099 F383 -V406 -0.00144402389611775 L367 -L374 -0.00392234619751664 Y408 -K415 -0.00527790960568453 V379 -L405 -0.00545587108147139 L375 -Y408 -0.00636610085450329 E371 -H376 -0.00746161319958638 V379 -T411 -0.00861641820608433 N389 -R396 -0.00952467671650004 P381 -D398 -0.00970889864238411 Q401 -L409 -0.0100277984667008 F385 -A393 -0.0105270747951396 I391 -R397 -0.0105877063423607 A377 -K415 -0.0148281624791347 A402 -T411 -0.0149885677259922 H376 -P381 -0.0155128289926683 L384 -Q401 -0.0165157725694174 Q378 -T411 -0.0199769791568169 N380 -Y408 -0.022774350977949 N380 -Q404 -0.0247878135355677 I391 -S399 -0.0251696818146705 H382 -Y408 -0.0263440518652875 Q369 -L409 -0.0263494220887459 V379 -A402 -0.026747073282017 P381 -T411 -0.0291856970649498 Q407 -N416 -0.0301223755622921 R397 -A402 -0.032240412829962 T368 -R414 -0.0333826133952368 S370 -K415 -0.0336468816160607 I372 -V406 -0.0371797138763625 N389 -I395 -0.0373986913412638 T390 -I395 -0.0380557117729996 F383 -S410 -0.0386393230613631 F385 -A402 -0.0400161615994188 F385 -I395 -0.0403450416297524 A377 -V406 -0.0403908490077951 S403 -F412 -0.0406369664414514 E371 -S410 -0.0416860704012931 L374 -N416 -0.0418388147221744 H376 -Y408 -0.0419307015089281 S370 -V379 -0.0424680140613947 V394 -A402 -0.0432062596127007 Q401 -V406 -0.0435062326299595 Q407 -F413 -0.044099009467028 K373 -Y408 -0.0460513084097971 D398 -Q404 -0.0474609194007314 F385 -V394 -0.0475485460305736 V406 -F413 -0.048051694220236 Q404 -S410 -0.0481708491566251 N380 -L405 -0.0489020690155044 A387 -R396 -0.0498509991903495 A377 -Q401 -0.0498576566937512 S370 -F413 -0.0502141470970003 K373 -L405 -0.0534886232592164 A377 -S410 -0.0537439682971619 I372 -A377 -0.0539573854713939 Q378 -Q407 -0.0571038056435938 R396 -S403 -0.0584481658022411 V379 -N386 -0.0599160532304592 Q378 -Q404 -0.061482615049917 L384 -S410 -0.0621875889642096 D398 -L405 -0.0623895219286092 I395 -S403 -0.0624816019592052 S403 -S410 -0.0640726104841871 T368 -K373 -0.066210937405407 S399 -Y408 -0.0670216555031656 A393 -E400 -0.0670415834248679 L409 -N416 -0.0672564399357238 R397 -S403 -0.0675400710726559 I391 -D398 -0.0688867819960488 L374 -S403 -0.0689380664474282 A377 -Y408 -0.0691969962616346 L374 -L405 -0.0692589814554943 D398 -S403 -0.069288928789597 K364 -Q369 -0.0694994485349743 Q369 -L375 -0.0703027370904454 R396 -Q404 -0.0703977467278902 V379 -Y408 -0.0717380954939357 P381 -T390 -0.0723409784655347 N380 -A402 -0.0728368256123639 L375 -F412 -0.0746953820233838 N386 -V394 -0.0751450747867586 L367 -H376 -0.0752400284301924 A387 -E400 -0.0753684953391178 N380 -V406 -0.0761290291140007 H382 -N389 -0.0768811624608694 H382 -T411 -0.077528443580281 S370 -S410 -0.0785461314253699 F383 -R396 -0.0789724435546777 F385 -Q401 -0.0796403304515612 L375 -L409 -0.0799598908520665 A387 -D398 -0.0822982941203191 S370 -A377 -0.0823178340690109 D398 -Q407 -0.0830090782353057 I372 -F412 -0.0830588327217439 F385 -S403 -0.0831863907059813 A387 -Q401 -0.0838297384520859 I372 -L409 -0.0841708524584757 F385 -T390 -0.0846524873056635 H382 -S403 -0.0849499452147979 S370 -V406 -0.0855580326976926 A402 -Y408 -0.0868255830451635 N380 -A387 -0.088983578339785 I395 -Q404 -0.0909691354242304 L388 -R397 -0.0918113191671788 E371 -L409 -0.0920447850000559 H382 -A387 -0.0934589200882594 K373 -H382 -0.0934610541831234 P381 -R414 -0.0937560951937466 L374 -V406 -0.0937654052359491 P381 -R397 -0.0942599290565678 F385 -S399 -0.0953054494737176 A365 -I372 -0.0959105109028255 S399 -Q404 -0.0964517061753989 Y408 -R414 -0.0974296177168842 Q404 -F413 -0.0983788600659836 A387 -S399 -0.0995643458603972 A377 -E400 -0.100622708825171 A377 -F385 -0.100693522616106 F383 -S403 -0.102493721164316 A387 -V394 -0.103596703603516 V406 -N416 -0.104209498520527 E400 -L405 -0.104998790380413 N380 -F385 -0.10506010223793 L384 -V394 -0.107240337676294 H382 -L409 -0.110277706369138 K373 -R414 -0.114392537492461 I372 -K415 -0.114588896578037 L374 -Y408 -0.114775796943837 A365 -L374 -0.116594145037993 I372 -P381 -0.117050133590737 P381 -Y408 -0.118518540389684 A377 -F413 -0.118591625889622 F385 -I391 -0.12226428953818 Q378 -L405 -0.123147663932654 L405 -R414 -0.123406977791804 P381 -A402 -0.12351258186626 N386 -I395 -0.12537716741427 L384 -R396 -0.126249223789933 L374 -F383 -0.126610001598298 Q369 -H376 -0.12695447083592 P381 -N389 -0.12696085557115 Q378 -N416 -0.127193141639139 L388 -S399 -0.127779644435124 Q401 -Y408 -0.127793025768841 H382 -T390 -0.132997137351376 L384 -E400 -0.13354850918777 F383 -N389 -0.134716031380387 K373 -V379 -0.136679269323115 S370 -H376 -0.137253215510794 V379 -F413 -0.138397533242915 E371 -A377 -0.139344144263344 F385 -R397 -0.139391889253431 F383 -E400 -0.13960793275411 R396 -V406 -0.139747260404746 Q404 -T411 -0.140385113442218 Y408 -F413 -0.141842716875435 F383 -Q407 -0.14518878425941 S410 -K415 -0.146204973692722 P381 -A387 -0.148501205111309 L366 -L375 -0.149155003522675 L384 -I395 -0.149947446449093 L374 -S410 -0.149956159520162 L405 -F412 -0.151706374620804 H382 -V406 -0.151761853428981 H376 -L405 -0.153539837507496 I391 -E400 -0.155291687487469 L375 -S410 -0.157016783685282 E400 -L409 -0.159268075291615 Q378 -N386 -0.160463137527342 K373 -P381 -0.160646920885688 K373 -L409 -0.16079484856497 A377 -F383 -0.161931722374966 Q378 -S403 -0.162680359363895 A377 -L384 -0.162736158119682 R396 -L405 -0.16500109929205 K364 -L375 -0.167408175871794 K373 -S410 -0.168034007523214 N380 -Q401 -0.169052137570673 E371 -V406 -0.170296729467556 N380 -L388 -0.170577624157094 S410 -N416 -0.172026832671808 H382 -Q407 -0.174480494767207 V406 -K415 -0.176947753300969 L374 -N380 -0.179948793148575 I372 -V379 -0.180679944425963 T411 -N416 -0.185001533861495 L375 -F413 -0.185906106689399 A365 -E371 -0.188314509747938 A377 -H382 -0.189447151612283 L409 -K415 -0.194541229151822 K373 -F413 -0.194702611361383 R396 -A402 -0.197355453671325 A377 -S403 -0.199318240577692 L388 -E400 -0.199568120847376 A377 -T411 -0.202191523513346 S403 -L409 -0.203213271556051 V379 -R414 -0.204840505781736 L366 -K373 -0.207071688766026 L374 -K415 -0.207648348114811 K373 -V406 -0.21103299388023 V406 -F412 -0.212028907145813 H376 -S410 -0.213374106093833 H376 -R414 -0.217742695265017 L367 -L375 -0.229192059996063 A387 -I395 -0.229505569401058 I395 -E400 -0.231681391715814 I395 -Q401 -0.233518024671604 R397 -V406 -0.234048013823795 L374 -F412 -0.235447308322648 H382 -L405 -0.236555935488767 L367 -K373 -0.239452007629247 L375 -H382 -0.244330188768293 L384 -N389 -0.246075835903808 V379 -S410 -0.25044793718554 K364 -S370 -0.252537036807623 H376 -F383 -0.255407628806145 L388 -I395 -0.264179188848225 L384 -I391 -0.268189048096361 L367 -I372 -0.26929101444062 L384 -A402 -0.274988024298758 P381 -S399 -0.277802711441614 A377 -L405 -0.279601564170808 L375 -R414 -0.282148473947041 Q378 -L384 -0.286006083445436 N380 -S403 -0.28769692226467 L384 -T390 -0.298015862073321 T368 -L375 -0.300851409825224 L375 -P381 -0.301084106046654 L405 -T411 -0.303425122976449 T368 -L374 -0.309864506727289 S399 -V406 -0.311750798273692 H376 -H382 -0.313135239874634 L374 -Q407 -0.314508242756734 K364 -F413 -0.319859338326968 L405 -S410 -0.322867321490799 P381 -S410 -0.323719854521383 H376 -V406 -0.32390405936865 S370 -L375 -0.325224744955751 E400 -V406 -0.327030099757036 K373 -K415 -0.327166766859798 K364 -I372 -0.331375595936065 S399 -L405 -0.34294412696274 Q401 -Q407 -0.343340002621954 V379 -V406 -0.346686043771273 V379 -F385 -0.357555765324482 A387 -A393 -0.406279504719858 Q378 -F383 -0.416194868473928 L366 -I372 -0.416529498872118 L374 -V379 -0.444260352362305 Q378 -L409 -0.479699307147862 P381 -L405 -0.505170617828609 P381 -Q404 -0.632123786658376