[Mon Aug 29 17:22:25 2016] >Input file: TMS4WFQ6M1G.pdb >TM segments: 47-68_ 102-127_ 145-165 MAIDEN score = -15.9453 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I106 -I111 1.20123772401886 Y160 -F165 0.999222216210517 W53 -A58 0.883147333982343 A152 -W157 0.81768354002264 L118 -E124 0.800057106346077 F153 -V158 0.788335508127365 V119 -E124 0.678824209235311 C59 -L64 0.66148278906013 Y115 -T121 0.627978130343134 M55 -A60 0.595728989171797 P107 -F112 0.595519651439808 L154 -P159 0.591273422814749 A60 -F65 0.524696608810493 T121 -A126 0.505404296045383 G116 -T121 0.402031528587831 S52 -H103 0.395921157595923 F104 -C156 0.356649388082476 C120 -A127 0.356625825672668 C114 -K123 0.354848755200073 I106 -F112 0.351617554048904 P159 -A164 0.343244328416882 M149 -I155 0.331066321333135 A50 -A58 0.325517289767289 C156 -A161 0.322945821233291 S52 -A60 0.318182454049701 Y115 -C120 0.302095290714003 V146 -I151 0.292249501585313 M149 -L154 0.290182874638196 W53 -C59 0.285217373524217 M105 -W157 0.280379169027024 C59 -F104 0.275611485159727 N117 -V122 0.264928846531958 V122 -V146 0.259627275807461 C114 -V146 0.250505650112504 L118 -K123 0.243719020300058 W157 -A164 0.229823146069331 V102 -I111 0.228144591956963 G48 -A56 0.213534313778867 V122 -M149 0.211602654731009 I106 -C114 0.2054488056085 T121 -I148 0.205041771494361 I54 -C59 0.204328666234949 W157 -S162 0.202476049966752 A58 -G66 0.200346031289334 V102 -L108 0.197584203724528 V150 -I155 0.189122819622383 L108 -M149 0.179991422641707 A61 -G66 0.178324259035202 V102 -P107 0.17688597469999 I151 -W157 0.16182760310322 V49 -A58 0.16021080248148 V122 -I147 0.156350618063962 M105 -A161 0.146560123719536 I148 -C156 0.146242320445653 A127 -M145 0.139835609738432 M105 -Y160 0.139448454345858 L118 -I151 0.138850119488986 M145 -L154 0.134978943855515 L108 -G116 0.134596953353309 H103 -V110 0.132719460669006 L108 -Y115 0.128420693368921 C114 -M145 0.126835090461898 Y115 -K123 0.122861440906589 C114 -M149 0.122700484622339 V110 -V119 0.122420424155612 A152 -Y160 0.122128917045561 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