[Fri Aug 26 17:24:27 2016] >Input file: TMS7Q321M1D.pdb >TM segments: 38-62 MAIDEN score = 5.1740 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S45 -H50 10 F44 -V49 0.995350438690297 W41 -F48 0.957983974372834 L43 -F48 0.699586433764681 F44 -G51 0.62376626266365 F44 -H50 0.587070245098887 L43 -V49 0.562375234773852 L43 -H50 0.488204297708571 S46 -A52 0.467452937633651 S45 -A52 0.357770663085676 A42 -A53 0.342916902698681 W41 -G51 0.259922334837934 G54 -Q62 0.246532200204771 V55 -L61 0.210564920690202 L47 -V55 0.206975685866877 A42 -H50 0.185533523864851 W41 -V49 0.184414592428844 A42 -F48 0.175382233826545 S45 -A53 0.12258000127844 L40 -S46 0.112120656612539 S45 -G54 0.108547148799412 L47 -L56 0.106567476993538 G51 -L56 0.105222132494231 S45 -F58 0.0925825639436013 F39 -S46 0.0896707544916957 L40 -F48 0.0878533921902616 W41 -L47 0.0852225414816381 A52 -M60 0.0801453090479814 F39 -A52 0.0656501304042996 I38 -L47 0.061289889684689 H50 -V55 0.0571628544322458 W41 -A52 0.0511330771067584 L47 -A52 0.0452282171422889 S46 -M57 0.0420228297337053 F44 -L56 0.0412619193894663 S45 -L56 0.0401847325697535 F39 -L47 0.0355935027729188 A42 -G54 0.0324124099653447 I38 -H50 0.0282545133408121 S46 -L56 0.0278722595794946 F39 -F44 0.0242446342431908 L43 -G54 0.0175963861884267 F39 -S45 0.0123317815462419 S46 -F58 0.00945306265080337 G51 -M60 0.00744385123383928 F48 -M57 0.00318771142549501 A42 -V55 0.00255469903920513 G51 -M57 -0.00627300305128253 L40 -H50 -0.00950173821090594 S46 -A53 -0.0109512435985559 F44 -V55 -0.0185267202431769 L47 -M57 -0.0220059810334474 F39 -G51 -0.0223990358727328 A53 -L61 -0.0226798942192179 V49 -M57 -0.0244669226146099 G51 -V59 -0.0317783937806677 L40 -G51 -0.0328020725658745 L47 -A53 -0.0379944444570279 G54 -V59 -0.0563390328768048 A53 -M60 -0.0564207133335763 H50 -F58 -0.0577618983391837 S46 -V55 -0.0643466882134476 F44 -A53 -0.0691508129485685 L43 -V55 -0.06922037021417 I38 -S46 -0.0838659466052429 I38 -S45 -0.0840117986635922 A42 -L47 -0.0867427344929528 W41 -S46 -0.087885758797654 F39 -H50 -0.0887129228208297 A53 -Q62 -0.0921836597053001 F44 -A52 -0.0942908462006091 G54 -L61 -0.100550949548325 L43 -G51 -0.101809911848269 G51 -L61 -0.102671516998051 F48 -A53 -0.112188681716729 L47 -F58 -0.117299739620994 A52 -V59 -0.122672983594146 H50 -L56 -0.125589825436755 V49 -F58 -0.134018540581116 W41 -A53 -0.135289499333785 A52 -L61 -0.152232063847842 A52 -F58 -0.152670974649212 F48 -L56 -0.156057603911493 L40 -A52 -0.159200724631244 F44 -G54 -0.164329945664156 L43 -A52 -0.165014257146095 V49 -L56 -0.166701836806304 F39 -F48 -0.168154465506779 V49 -G54 -0.168688656701913 G54 -M60 -0.169926237826211 G51 -F58 -0.17443943825854 I38 -V49 -0.175563018543615 S45 -M57 -0.177331459756642 F48 -G54 -0.177787137246897 A42 -G51 -0.183011269964115 L40 -S45 -0.183652295292912 I38 -F44 -0.18410830508484 I38 -F48 -0.184511228905521 F48 -V55 -0.187115721372094 S46 -G54 -0.208622881875045 L40 -L47 -0.232004150904675 A42 -V49 -0.245998316938433 A52 -M57 -0.248103507913484 A42 -A52 -0.248499872670334 L43 -A53 -0.277500825719404 H50 -V59 -0.281681994436326 V49 -V55 -0.299508057257134 I38 -L43 -0.306283588817129 H50 -M57 -0.322504794747105 S45 -V55 -0.326598896528726 L47 -G54 -0.329881995016891 V55 -M60 -0.33551432368063 A53 -V59 -0.341445141010398 W41 -H50 -0.341728103546599 F39 -V49 -0.348238039255766 V55 -Q62 -0.352913800897129 M57 -Q62 -0.353248518630414 A53 -F58 -0.36660171953298 L56 -L61 -0.395637249361549 L40 -V49 -0.402841309012106 L56 -Q62 -0.443477266051087 S46 -G51 -0.698293477543222 S45 -G51 -0.733138015831663