[Fri Aug 26 17:34:11 2016] >Input file: TMT2I2H2M3D.pdb >TM segments: 538-557_ 605-638 MAIDEN score = -11.2786 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C538 -R543 1.2077427537671 I551 -E556 1.13832280562794 V606 -R631 0.824830619783654 N613 -V620 0.679122425001692 V630 -I636 0.552365222264382 V606 -N632 0.541338921310222 A609 -N632 0.52429585432934 N546 -I551 0.491852735055767 M611 -K616 0.474674508171537 Q608 -K616 0.443246815256427 V606 -T629 0.404344616332563 A624 -T629 0.377373423649377 V622 -D634 0.328702124223058 R631 -I636 0.303129497448815 M553 -N613 0.30312474352272 S549 -K616 0.290151195785796 M611 -R631 0.287924729078292 V622 -V630 0.284283667469605 D612 -V622 0.281868118600952 P555 -Q608 0.276461771792204 N546 -G557 0.274401659912169 R631 -M637 0.26956079644904 G610 -N632 0.268187584587274 G610 -D634 0.261456346672784 A624 -R631 0.254796016316954 N613 -S633 0.252922449489091 D612 -D634 0.249582742091555 A609 -G617 0.243502453148286 Q608 -T629 0.235432467293743 I623 -M637 0.230886617346167 D612 -G617 0.225491382056359 R626 -M637 0.21256152643317 A609 -F621 0.210849889086448 V620 -I636 0.208515288734973 E540 -V545 0.206873133097884 V607 -N632 0.202416968268217 N632 -M637 0.201181346389877 A541 -D548 0.195739314201102 M553 -L614 0.19380480238716 G610 -V630 0.193405666176568 V606 -D634 0.190936608009582 V620 -M637 0.189354180038419 T629 -D634 0.186520817189515 L554 -D612 0.186184306266842 D612 -R631 0.178439944055619 D548 -M553 0.17511631673919 P555 -E605 0.174533925857959 A624 -S633 0.168937828675778 V622 -R631 0.168077216879232 L554 -N613 0.167342964005759 I623 -N632 0.163096900947452 L614 -T619 0.157881313901354 G610 -V622 0.156530302380664 T619 -I636 0.152950793266006 R626 -N632 0.15061827756852 I551 -G557 0.148116586613522 Q608 -N632 0.146094519912822 F550 -E556 0.143572471924281 R552 -Q608 0.142780653203126 P555 -D612 0.137336611309645 Q608 -R618 0.136300751159687 R626 -S633 0.131391560587386 V622 -S628 0.128363331973192 V607 -S633 0.125783235722404 E605 -M611 0.119249811474171 A609 -I623 0.115817097872371 V606 -A624 0.115068740723155 N613 -R631 0.114455520661419 Q608 -N613 0.112905596422564 H625 -I636 0.107287803638932 V622 -S633 0.106168575674318 A624 -N632 0.103968075714743 G610 -T629 0.101347187433822 A609 -T619 0.100727189753046 A541 -S549 0.100621728201796 E540 -D548 0.100316461548161 G610 -V635 0.098354093279595 L614 -D634 0.0969790410934137 H625 -V630 0.0947052031799951 D612 -N632 0.0902068285874784 L627 -M637 0.0895309616435344 R626 -V638 0.0877667471299022 T629 -M637 0.0870422242184656 L554 -V607 0.0856442113346676 S628 -M637 0.084812955380797 P555 -M611 0.0847870115528471 S633 -V638 0.0846772464907026 I551 -M615 0.0832538926690365 Q608 -V620 0.0828298683457049 V622 -I636 0.0806148183651541 M611 -T619 0.0798149364453855 C538 -S549 0.0792976071247947 N613 -D634 0.074303287778402 V606 -R626 0.0735115522301399 M611 -V622 0.069896426445343 R626 -R631 0.0693134412909095 T619 -N632 0.068687790946905 T619 -V635 0.0681607084109307 F621 -L627 0.0679201983506381 H625 -S633 0.0652786218997017 M553 -Q608 0.064891604701554 V607 -S628 0.0618482677565617 L544 -G557 0.0587429779023172 V607 -D612 0.0534655686053895 F621 -V630 0.0528735581599404 S628 -D634 0.0528501011212496 N613 -V622 0.0527976313276917 V620 -R631 0.0527941846684113 G610 -S628 0.0517133871414597 V607 -G617 0.0506165606269249 M553 -M615 0.0505319532958155 D612 -S633 0.0498675229293864 E605 -S633 0.0488524803009804 S549 -M615 0.0476052354904115 V622 -T629 0.0428266889043556 C538 -A547 0.0423154025661672 L554 -L614 0.0411396239636019 A547 -R552 0.040758624255512 N546 -E556 0.0404394469246494 Q608 -T619 0.0403913077964171 G610 -T619 0.0401397056340616 R618 -N632 0.0398412270705357 R552 -G557 0.0394503458098434 F621 -D634 0.0389563762132443 N613 -F621 0.0382922971042789 M553 -A609 0.0358616022261713 M611 -D634 0.0342541546544934 L614 -S633 0.0329986191265058 L544 -M553 0.0326349584805143 L554 -M615 0.0309805618782431 H625 -V638 0.0304778457648318 F621 -N632 0.0303814569503811 I551 -Q608 0.0291796596020841 T629 -V638 0.0286631540181927 V606 -L627 0.0254808548246332 A547 -P555 0.0254643374035348 G617 -V622 0.0252387559875369 F550 -A609 0.0233238379494241 L614 -V622 0.0230307537841112 S628 -I636 0.0213626168520626 A542 -F550 0.0186197344852905 E605 -V630 0.01788831624022 G610 -F621 0.0145588702854758 D548 -G557 0.0141619971849227 I623 -T629 0.0139474444688061 D548 -E556 0.0123135372823517 I623 -V630 0.0122773867347004 M611 -G617 0.011259683873161 M611 -F621 0.0104551451624051 S549 -D612 0.00926967976225543 F621 -R631 0.00788239004737701 V606 -V622 0.00715084283155853 I539 -A547 0.00653691168503834 F621 -V638 0.00619380898700861 R543 -R552 0.00596562851804361 M611 -R618 0.00550392545733214 P555 -A609 0.00475744621175078 S549 -E556 0.00293067296829586 L627 -V635 0.00254192673967601 E540 -S549 0.00214730444730549 N546 -L554 0.0017811917463213 L554 -A609 -2.92244786699314e-05 G617 -S633 -0.000496684631414723 I623 -R631 -0.00134048784496077 V620 -T629 -0.00147716534096176 Q608 -S633 -0.00311966653290097 F550 -M611 -0.00377545281484981 F621 -T629 -0.00797070557739188 L554 -E605 -0.0142618759047554 V606 -I623 -0.0146045798918477 R543 -I551 -0.0146230567841572 E605 -R631 -0.0162809036476962 A609 -V630 -0.0163238581177652 A624 -V635 -0.016696668159212 E605 -R626 -0.0222625553014968 M615 -V620 -0.0233623237074414 A609 -A624 -0.0242004785797238 L554 -G610 -0.0280063075396981 N613 -V635 -0.0283215319253327 A624 -V630 -0.0290308973501645 Q608 -V630 -0.0298581551082382 E556 -Q608 -0.0320853980011382 R626 -I636 -0.0325797232441734 M553 -M611 -0.0327327691860284 E605 -V622 -0.033210709900878 Q608 -V622 -0.0344294768079205 V607 -V622 -0.0359205384625954 E605 -N632 -0.037411423584123 T629 -V635 -0.0377736237829271 V606 -L614 -0.03871057246422 A542 -I551 -0.0401806399393116 V607 -V620 -0.0402374280201765 V607 -M615 -0.0415692644305943 V545 -G557 -0.0416518359873672 E605 -A624 -0.0436784541325967 L614 -N632 -0.0436791520211248 V607 -R631 -0.0442652317566345 I623 -S628 -0.0466674593130314 I539 -D548 -0.0477004350653376 L614 -F621 -0.0485363035147746 N613 -N632 -0.0497847962284288 F550 -D612 -0.0508517565847226 V620 -S633 -0.0509706830334713 V607 -D634 -0.0512505126860709 F550 -G617 -0.051296923016181 S549 -P555 -0.0519216511411624 M611 -V620 -0.0524901904383381 P555 -M615 -0.0559018083078673 E605 -S628 -0.056600167531708 L627 -D634 -0.057322297962072 V622 -N632 -0.0603645055530737 V545 -M553 -0.0605986399471372 P555 -V607 -0.0613709618921106 A609 -V620 -0.0615482051767269 F550 -Q608 -0.0618240672050367 G610 -I636 -0.0632648323990361 E605 -N613 -0.064331167891392 S628 -V635 -0.0653980177329898 V606 -F621 -0.0700096887097077 L544 -R552 -0.0700136288022755 L614 -R631 -0.0704315982878778 G610 -I623 -0.0705439990249266 Q608 -R631 -0.0716057300793975 G610 -R631 -0.0722367814117826 V622 -V638 -0.0726765943992929 R543 -G557 -0.0735979720603295 R543 -S549 -0.0744771092993238 A609 -D634 -0.0758763918605585 I551 -D612 -0.0760582490126922 R618 -S633 -0.0771783729582542 S628 -V638 -0.0772483377777684 A609 -S628 -0.0791095282902985 V606 -N613 -0.0817142737701229 L554 -M611 -0.0842007061179899 V607 -V630 -0.0871464789723022 V606 -V620 -0.0872907349725396 S628 -S633 -0.0874633721721567 R552 -K616 -0.088730835342679 Q608 -M615 -0.0900171193181443 N613 -T629 -0.0907590080212812 C538 -N546 -0.0934956163677461 E605 -D612 -0.0941046437957793 K616 -N632 -0.0950541129431529 V620 -V630 -0.0960654017961188 H625 -N632 -0.0989939322763016 Q608 -G617 -0.0993775484667845 E605 -V620 -0.0999031707891587 A547 -K616 -0.100829267992132 I623 -D634 -0.101303075748342 G617 -D634 -0.102873260199835 N613 -V630 -0.104299412105121 V606 -H625 -0.105796149229151 G610 -G617 -0.106762193999261 A609 -K616 -0.107346370843124 N546 -M553 -0.108328047163961 N632 -V638 -0.108434702210938 L554 -V606 -0.108815922157626 M611 -N632 -0.109827158911332 R543 -D548 -0.110241091599521 V545 -L554 -0.111123479358046 C538 -V545 -0.113981843213241 N546 -K616 -0.114243338209355 R552 -D612 -0.11797759270287 R618 -D634 -0.118079696594979 I551 -K616 -0.118288929800169 D612 -F621 -0.120122330175873 M611 -S633 -0.124005665348825 F550 -P555 -0.127267982335942 A541 -F550 -0.127862951547057 F621 -R626 -0.128329498424177 N546 -P555 -0.128659380345168 G610 -K616 -0.133927934983607 A547 -G557 -0.137605658005947 A609 -R618 -0.13945596355851 H625 -M637 -0.142302940340256 N613 -T619 -0.144401651759998 F550 -R618 -0.144431562788099 T619 -M637 -0.145896362337738 E540 -N546 -0.145967994526062 M615 -N632 -0.146690312838435 V545 -F550 -0.14728237324025 F621 -I636 -0.147704588612735 I623 -S633 -0.15073146551519 V630 -V635 -0.150809866535193 L544 -E556 -0.150991349894718 M611 -T629 -0.153408152277745 E605 -T629 -0.153425901150209 L554 -K616 -0.154242789947855 A609 -T629 -0.156234859461876 V607 -K616 -0.157265445339522 M553 -K616 -0.159460782442064 V606 -M615 -0.161463556249321 G610 -V620 -0.162615605385446 A624 -D634 -0.162914241867788 L614 -V620 -0.163126985775461 V545 -R552 -0.163190054095187 M553 -G610 -0.163236127872991 H625 -R631 -0.165152944513304 R552 -M615 -0.165815352423079 E605 -L614 -0.165880383024795 L627 -V638 -0.167342842997084 V545 -I551 -0.173745389336865 G610 -S633 -0.174287471056991 G617 -N632 -0.174406925772589 A547 -E556 -0.180439137304457 R543 -F550 -0.184676396359852 F550 -K616 -0.185559892202656 A624 -I636 -0.186143254574625 V545 -E556 -0.186161387256805 V622 -L627 -0.187009424492889 G610 -R618 -0.187765766620965 F550 -N613 -0.190291451254965 A609 -S633 -0.19940315348545 A542 -S549 -0.201333505738455 D612 -T619 -0.204363693837798 E556 -D612 -0.204482371627154 N546 -R552 -0.205451609660948 A542 -D548 -0.208244422200219 L627 -S633 -0.209511016321239 V606 -V630 -0.210284621137241 T619 -D634 -0.21040931805391 D612 -R618 -0.21447667385948 T629 -I636 -0.215611157147533 A624 -M637 -0.2158803389604 V607 -L614 -0.218140897459255 M553 -G617 -0.220109597051089 I623 -V635 -0.220228842700837 F621 -S633 -0.224975365440722 R626 -V635 -0.226758834174833 T619 -S633 -0.227139857853591 M553 -D612 -0.228271601542216 F550 -M615 -0.22951673973489 F550 -G557 -0.229550258224681 A541 -N546 -0.232342353161568 D548 -P555 -0.234633561254904 A541 -A547 -0.234821147752966 R618 -V635 -0.235194879701382 A547 -L554 -0.239971967065599 D548 -L554 -0.242197995342466 A609 -R631 -0.246266305658863 C538 -D548 -0.249801277403958 V606 -D612 -0.250096212177397 E540 -A547 -0.25218200558431 L627 -N632 -0.253205747367914 I623 -V638 -0.256325758374182 S549 -G557 -0.257689181635284 C538 -L544 -0.259135131690647 C538 -F550 -0.266707979905544 V607 -T629 -0.266973036681615 V606 -S633 -0.271159212475719 L544 -F550 -0.273624304627778 E605 -G610 -0.273915322697831 A609 -V622 -0.274280481411608 D612 -V620 -0.275561492626625 V630 -V638 -0.277803834298163 A609 -L614 -0.278162377795891 V620 -D634 -0.281071162553368 V622 -V635 -0.283726495460309 S549 -L554 -0.283806597084423 L627 -I636 -0.287801916758417 R631 -V638 -0.287933369979499 N613 -R618 -0.288972022856202 V620 -V635 -0.298918378750049 A542 -A547 -0.300880434460641 I539 -N546 -0.301917969995433 V622 -M637 -0.317057845956137 I623 -I636 -0.317569162658966 G610 -M615 -0.317845914021229 F621 -M637 -0.319906263753988 V630 -M637 -0.323319951678225 M553 -R618 -0.323480937849084 A624 -V638 -0.324251692308088 R552 -M611 -0.324476093354806 L544 -S549 -0.327042118848435 V607 -N613 -0.331693440841663 V620 -N632 -0.337948471552103 K616 -F621 -0.348920617560998 A547 -M553 -0.351736727956063 V606 -M611 -0.352273382022608 V606 -S628 -0.365206501602106 F621 -V635 -0.369774438177592 I539 -L544 -0.375998189920952 L544 -I551 -0.379318379348491 L554 -Q608 -0.3977755070895 A609 -M615 -0.414612303151655 I539 -V545 -0.466818696536833 Q608 -L614 -0.500347039158641