[Fri Aug 26 17:37:37 2016] >Input file: TMU2ASB1M1D.pdb >TM segments: 568-575_ 609-640 MAIDEN score = 7.7341 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L625 -L631 10 V623 -P635 1.20683273746147 L625 -L632 1.19278575650279 L624 -L632 0.883918336169152 L624 -L631 0.826414364174896 V623 -L631 0.74127635502099 F609 -F614 0.497125002279329 V623 -S633 0.474264253681432 E630 -P635 0.449734947487905 V623 -T634 0.448786563715306 L624 -P635 0.417146893388984 V623 -L632 0.412142362592773 L625 -S633 0.406368915425669 S618 -P635 0.358835853204493 E611 -S616 0.341486722486338 Y621 -V636 0.330847893631272 Q610 -P620 0.325530197452101 S616 -Y621 0.322990342209803 P620 -Y638 0.322946140966172 Q619 -Y638 0.320866013119022 V575 -Y622 0.285874027669625 S626 -L631 0.277999556551457 L624 -S633 0.275155152227243 T629 -P635 0.27018268611686 Y622 -V636 0.264777182078475 Y621 -Q637 0.257856688919907 S626 -L632 0.254225812207996 E611 -Q619 0.243647636334929 V623 -D628 0.224770382519664 S572 -S618 0.210023250792079 Y621 -Y638 0.20774431730549 F614 -V636 0.197984103256007 Q619 -P635 0.193713393728751 S615 -Q637 0.193208173622349 Q610 -P635 0.189738888747992 S572 -Q610 0.182224985234369 S616 -Y638 0.16928370417239 Y621 -S633 0.168411875572782 N613 -Y621 0.168247142239338 E611 -P635 0.167118239603285 N613 -P635 0.166674325409498 E611 -Y622 0.166169443643599 S615 -V623 0.164654648109172 S572 -P635 0.161694761256921 N613 -L625 0.16120718983314 T629 -T634 0.159944529327404 V575 -E611 0.156630305254103 F614 -Q637 0.154968764279907 S615 -S633 0.150149456547961 L570 -P627 0.149357414823521 Y574 -S618 0.148597289712234 Y621 -L631 0.140595688362888 N613 -D628 0.140085433464168 V623 -V639 0.138730713499721 Q619 -Q637 0.136870363371147 F614 -Q619 0.134633526769701 Y574 -A617 0.130200465483638 N613 -E630 0.127661241111839 A617 -P635 0.123962880536546 Y568 -L631 0.121323954169937 V575 -V623 0.121231037352178 A617 -V636 0.120725413120297 Q610 -Y621 0.120698249270609 Q610 -S615 0.114738609849556 L573 -V623 0.113264511108204 S618 -V623 0.111270717747849 V612 -S618 0.109653430251566 P620 -D640 0.107755293273783 S615 -Y622 0.105823344710939 Y622 -L632 0.103192961695883 I571 -T629 0.0980526385934848 S626 -T634 0.0976997488128037 V569 -L632 0.0976958124043499 Q610 -A617 0.0973365805642903 L573 -L624 0.0965654305375585 V612 -Y621 0.0942601934000846 F609 -T629 0.0927202175968569 N613 -S633 0.091544362906367 Y568 -T629 0.0875051600296136 N613 -V623 0.0850075163537143 Y622 -T629 0.0846670761704393 Y622 -Y638 0.0799535140583545 F609 -L625 0.0786863745137092 S616 -S633 0.0781488457472088 Q610 -V636 0.0761743728929083 Q610 -T629 0.0742764519974655 L570 -P635 0.0736957905470858 L624 -T634 0.0717096917931741 A617 -Y638 0.0679675149929944 Y568 -V623 0.067425647559336 V575 -S616 0.0658131535187323 N613 -Y622 0.0648201560428567 L573 -E611 0.0630300825208026 N613 -T634 0.0617200647105753 V623 -V636 0.0597322625166559 L570 -Y621 0.0584578743567388 Y621 -V639 0.0580417294792879 S572 -Q637 0.0580410404613749 F614 -E630 0.0576478402176424 A617 -Y622 0.0568764242271813 N613 -S618 0.0540500470195235 I571 -Q610 0.0536144584706708 F609 -Y622 0.0496715963925034 A617 -Q637 0.0495152045303661 S615 -L631 0.0492819536472737 A617 -V623 0.0463780894040342 S615 -V636 0.0459601714726285 L573 -F614 0.0453910381311546 N613 -L624 0.0424758503677642 E611 -Y621 0.0421075433627687 Y622 -V639 0.0411651841964702 F609 -Q619 0.0375277670670033 I571 -P627 0.0370988239455112 V575 -Q619 0.035370494746684 L624 -E630 0.0334766811407849 L573 -A617 0.0328542064792622 L631 -V636 0.0322127881510577 Y621 -P635 0.0304254198038278 L570 -S626 0.0300628194422452 L570 -L631 0.0291188722322246 S572 -L624 0.0275024104469206 L573 -S618 0.0271895575639292 P635 -D640 0.0246772662863406 D628 -S633 0.0238244016406602 Y622 -T634 0.0237593325378157 E611 -V623 0.0219948763737306 L573 -V636 0.0193769743411321 I571 -P620 0.0192768348813959 V569 -T629 0.0169521549352449 E611 -P620 0.0168392155419177 Q610 -T634 0.016089103822301 Q619 -V639 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