[Fri Aug 26 18:12:52 2016] >Input file: TMW6VQP7M1D.pdb >TM segments: 290-311 MAIDEN score = -2.0741 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A295 -V300 0.527837421931627 D292 -V301 0.315472903952021 Q294 -V301 0.301379578568461 D292 -V300 0.276468319795266 D292 -G298 0.25157109360472 D292 -D304 0.247750678666717 A293 -V303 0.164354905585639 D292 -K299 0.156159364115079 D292 -V303 0.154701245400684 K297 -L302 0.131597818821746 L291 -G298 0.119740291091976 A293 -V300 0.115055414862165 L296 -V301 0.109493101683231 L291 -L302 0.103072869561805 A290 -V303 0.0968035734929269 A290 -F305 0.0964454812247713 A293 -V301 0.0914312953751032 L291 -D304 0.0767183914731824 A293 -L302 0.0657869052243183 L296 -V303 0.0648385404220351 L291 -V301 0.0566430022092446 G298 -V303 0.04831534091986 D304 -S309 0.0317594501031473 L291 -V300 0.0233815255623062 A295 -V301 0.0168966666687655 F305 -I311 0.0166530127379669 Q294 -K299 0.00748149055682923 D292 -L302 0.00383561245503783 D292 -K297 0.00163838652461878 A290 -V301 -0.0185014200545992 A290 -G298 -0.0243496453396759 D304 -C310 -0.0286926331467612 Q294 -D304 -0.0343936210140461 D304 -I311 -0.0462478323620608 D292 -F305 -0.0679151904047277 A295 -D304 -0.0779550712783368 A295 -V303 -0.0780233629031013 K297 -V303 -0.108404436199609 Q294 -F305 -0.119842965567281 L291 -W306 -0.131097947511348 A295 -F305 -0.132834330395715 A290 -L302 -0.135712953765667 L291 -V303 -0.135919292237375 A290 -L296 -0.162348037651461 L291 -F305 -0.163974503286928 A290 -D304 -0.163977812332703 L291 -K299 -0.177544774629149 L296 -L302 -0.192964710191738 L291 -K297 -0.232204178827949 W306 -I311 -0.238080020643681 F305 -C310 -0.250577759335918 A293 -K299 -0.254327078449236 Q294 -L302 -0.259553683636659 A295 -L302 -0.276851313784046 A290 -A295 -0.282991502169211 A293 -G298 -0.311238043113597 A290 -K297 -0.339854288606732 L291 -L296 -0.370424780645819 Q294 -V303 -0.464528678749266 Q294 -V300 -0.466033491242617