[Fri Nov 25 00:56:05 2016] >Input file: TMW8XSJ3O1D.pdb >TM segments: 23-30_ 54-59_ 66-73_ 85-94_ 102-112 MAIDEN score = 19.2423 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H68 -W90 10 G55 -M73 10 V28 -A54 1.56766245810296 E91 -L106 1.40369461711657 L72 -I85 1.10059056493503 W94 -L104 1.04610011685518 Y24 -F56 1.00442090702676 L26 -F56 0.900537086170024 F56 -L72 0.887398151016378 V58 -L70 0.800889182045097 M73 -I85 0.788835415907869 I85 -V112 0.757545902891792 N66 -T93 0.734982075727552 W90 -L106 0.691774160535173 Y27 -F56 0.609012767113471 W67 -E91 0.59170860307791 G55 -Y71 0.584523362104577 P29 -A54 0.557764544178381 F56 -Y71 0.552594975727517 F56 -M73 0.532939563369292 N66 -W90 0.512198518970095 D25 -H68 0.464520652087984 S59 -W67 0.39917897274266 L26 -A54 0.395662866555424 K92 -L104 0.388999765853169 G57 -Y71 0.377574529977755 S59 -L70 0.356458062708763 N66 -W94 0.35328013796889 I85 -G111 0.343096459657697 W90 -T109 0.326418652905152 S59 -Y71 0.325145932809161 Y71 -I85 0.322657441620135 G69 -W90 0.310764565756534 Y27 -M73 0.307398519412803 Y27 -G55 0.304018532502279 M73 -G86 0.297373102930713 L72 -G86 0.292216831307382 P29 -Y71 0.286711016047206 L26 -G69 0.284273102435367 S59 -N66 0.263319857714154 G57 -L72 0.262070040795202 D25 -Y71 0.250052559643179 L70 -G86 0.24943537432045 L70 -Y88 0.24710160188855 F56 -G87 0.243839283210114 W90 -G111 0.237247721631292 W94 -G107 0.22395804194468 W67 -G89 0.221516114760205 T93 -H103 0.212671019805103 H68 -L106 0.209253646996616 V58 -L72 0.207136705969981 M73 -L110 0.201995838046664 W67 -T109 0.199320270876919 Y27 -G89 0.195886867519851 V28 -G57 0.195580415967413 G69 -G105 0.19540093324169 W67 -Y108 0.189691542583365 A54 -M73 0.188254175815749 H68 -L110 0.187660378023502 H68 -K92 0.185945123767144 Y71 -Y108 0.181225350981758 W67 -G105 0.179258072255617 G86 -Y108 0.179019799406363 Y24 -M73 0.178828534764877 G87 -T109 0.17705393209971 L70 -G89 0.176133916892395 N66 -F102 0.174490008823252 H68 -G111 0.174187376086651 G55 -Y88 0.171170543098516 W67 -Y88 0.170712477171749 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