[Fri Aug 26 18:20:32 2016] >Input file: TMX8HE12M1D.pdb >TM segments: 114-129_ 131-145_ 168-186 MAIDEN score = 9.6224 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S117 -L141 1.45927434579053 F119 -S139 1.37048525979349 L120 -I136 1.22711185490798 S114 -L143 1.21738748778257 F116 -I142 1.21689765929703 F119 -I136 1.18474742454089 L115 -I142 1.12749304445398 L121 -I136 1.09937325858788 L115 -L143 1.039370116036 F125 -P131 1.00772894805874 F116 -L141 0.900737630696029 L120 -I140 0.80191702747771 L121 -V133 0.72297135766756 L115 -A144 0.678292253254655 L123 -V133 0.659967413518725 F119 -L137 0.653732106844387 L120 -P135 0.620193762192232 S114 -L141 0.579020711412637 F119 -A138 0.550087418196505 F119 -P135 0.528848804611138 S117 -S139 0.504852981981009 F116 -L143 0.48788068036899 L123 -C132 0.439446282009666 L120 -L137 0.370160486555686 F116 -I140 0.369364886142127 L123 -P131 0.365157892744834 F119 -I140 0.338885021352486 S114 -I142 0.334359847963333 L120 -S139 0.319778213456131 L115 -L141 0.294987322257598 G122 -A138 0.293012193101653 L121 -P135 0.273579277219827 G134 -S139 0.26756424389594 T177 -M182 0.257213811957169 S117 -I140 0.242935185577641 T124 -G134 0.239536094528308 T118 -L141 0.239316045385533 S126 -P131 0.226771922251289 A138 -F171 0.213891244211122 A144 -S175 0.211736464519013 S139 -V169 0.208859272574785 S114 -S172 0.205895476367341 T124 -V133 0.201995614788888 S175 -K180 0.164598885784851 L127 -C132 0.160941576566505 L123 -G134 0.149722605953972 G122 -I136 0.146298617032498 L141 -K176 0.139244427340456 K176 -K181 0.133238416602474 L143 -T177 0.130085381591536 G122 -P135 0.129662287773949 L121 -G134 0.127908578663882 S172 -T177 0.126429879203971 L121 -S139 0.12374205870144 P135 -V169 0.121250594659637 S114 -A138 0.120641590879469 L115 -S139 0.119491667345352 L123 -L137 0.116284493618668 G134 -V169 0.112480859013229 T124 -I170 0.111714110313741 L121 -P131 0.110417952539432 I142 -I170 0.107153875500544 F116 -G145 0.102544831123512 T118 -I140 0.102300575475123 L123 -V169 0.0990239856546076 L141 -A174 0.0976728819881283 L121 -L141 0.092760995925306 G122 -I170 0.0920043923709635 A138 -S172 0.0900260765258802 V133 -A138 0.0887853657127007 L143 -S175 0.0887149357236847 L121 -I170 0.0875947174967376 L143 -I170 0.082954795808702 T118 -S139 0.0819580863555052 G122 -S172 0.08169710317085 A144 -A174 0.0796854688199988 L137 -F168 0.0782078358882698 A144 -S172 0.0767626362646443 G145 -S172 0.0757017887772804 T124 -S139 0.0745464485431302 A174 -F179 0.0724181552326471 L143 -F171 0.0719399799400533 G145 -S175 0.0692280996396697 T124 -V169 0.0691667379156324 T124 -F168 0.0669427638360771 G134 -I140 0.065888053191788 K176 -S183 0.0646128451848833 G145 -A174 0.0635696926969098 F119 -T124 0.059259017287121 F171 -T177 0.0573193069054527 F125 -F171 0.0538368392856081 L123 -F171 0.0526391213380633 G145 -K176 0.0507039667230429 L123 -G128 0.049747679202035 F119 -F171 0.0478849675970818 L141 -S172 0.047571592439466 L121 -F171 0.0461280744077461 F119 -L141 0.0457505364456221 F171 -K176 0.0454577439013728 L123 -I140 0.0439259783758059 S139 -F168 0.0427554390553615 S126 -G134 0.0426493192725002 I136 -F168 0.0423158188398967 S126 -V133 0.0418938454594615 V133 -I140 0.0411510059748244 T124 -I140 0.0403812725128692 T118 -I170 0.0386669091424308 K180 -K186 0.0376997481106525 L143 -F179 0.0350903242058367 I142 -L178 0.0349462157707858 T124 -F171 0.0333488154317885 L143 -A174 0.0328967695384872 S139 -S172 0.0296795517717898 L121 -V169 0.0267135691973257 S175 -K181 0.0245657809285411 F125 -V169 0.0243986610741942 G145 -T177 0.0240599034987552 S117 -I136 0.0229651048658202 T118 -P135 0.0208143316032965 S117 -A144 0.019281936849548 K176 -K186 0.0181958718991533 S117 -G122 0.0173363911481204 G145 -L173 0.0168835554421758 S117 -I142 0.0162857257563109 F125 -I136 0.0152018500473234 L120 -C132 0.0151459016799675 T124 -C132 0.0130585395287666 G122 -V169 0.01273009313317 L120 -V169 0.0120840846068533 W129 -G134 0.0117789499291843 A144 -M182 0.0111806711958486 G145 -K180 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