Protein Peeling

Results

announcement

19/01/2005 -new version
15/08/2005 -new help

Parameters choosen


R-value: 95

Minimal size of secondary structure: 8

Minimal size of protein unit: 16

Maximal size of protein unit: 0

Pruning tree ? No   CI cut-off:  0.2

Cut-off distance between atom: 8

Delta value in logistic function: 1.5



Hierarchical process of splitting



Tree
Contact Matrix



Visualisation of Protein units at all levels


Level 0
PU
Molecule needs Java 1.4 Structure


[1-60]:
1cewi_PU0_1-60
CI=2.76


[61-81]:
1cewi_PU0_61-81
CI=1.05


[82-108 ]:
1cewi_PU0_82-108
CI=2.46


Final level 1

PU
Molecule needs Java 1.4 Structure


[1-17]:
1cewi_PU_1-17
CI=0.32


[18-35]:
1cewi_PU_18-35
CI=0.51


[36-60]:
1cewi_PU_36-60
CI=2.95


[61-81]:
1cewi_PU_61-81
CI=1.05


[82-108 ]:
1cewi_PU_82-108
CI=2.46