2013

Articles

  • 1 – 2013 ; Mahajan, S. ; Agarwal, G. ; Iftekhar, M. ; Offmann, B. ; de Brevern, A. G. ; Srinivasan, N.
    DoSA: Database of Structural Alignments
    DATABASE (OXFORD) ; 2013 ; 48 ; [google scholar] 
  • 2 – 2013 ; Esque, J. ; Leonard, S. ; de Brevern, A. G. ; Oguey, C.
    VLDP web server: a powerful geometric tool for analysing protein structures in their environment
    NUCLEIC ACIDS RES. ; 41 ; (Web Server issue) W373–378 ; [google scholar] 
  • 3 – 2013 ; Craveur, P. ; Joseph, A. P. ; Rebehmed, J. ; de Brevern, A. G.
    Beta-Bulges: extensive structural analyses of Beta-sheets irregularities
    PROTEIN SCI. ; 22 ; (10) 1366–1378 ; [google scholar] 
  • 4 – 2013 ; Craveur, P. ; Joseph, A. P. ; Poulain, P. ; de Brevern, A. G. ; Rebehmed, J.
    Cis-trans isomerization of omega dihedrals in proteins
    AMINO ACIDS ; 45 ; (2) 279–289 ; [google scholar] 
  • 5 – 2013 ; Vamparys, L. ; Gautier, R. ; Vanni, S. ; Bennett, W. F. ; Tieleman, D. P. ; Antonny, B. ; Etchebest, C. ; Fuchs, P. F.
    Conical lipids in flat bilayers induce packing defects similar to that induced by positive curvature
    BIOPHYS. J. ; 104 ; (3) 585–593 ; [google scholar] 
  • 6 – 2013 ; Vanni, S. ; Vamparys, L. ; Gautier, R. ; Drin, G. ; Etchebest, C. ; Fuchs, P. F. ; Antonny, B.
    Amphipathic lipid packing sensor motifs: probing bilayer defects with hydrophobic residues
    BIOPHYS. J. ; 104 ; (3) 575–584 ; [google scholar] 
  • 7 – 2013 ; Chevrier, L. ; de Brevern, A. ; Hernandez, E. ; Leprince, J. ; Vaudry, H. ; Guedj, A. M. ; de Roux, N.
    PRR repeats in the intracellular domain of KISS1R are important for its export to cell membrane
    MOL. ENDOCRINOL. ; 27 ; (6) 1004–1014 ; [google scholar] 
  • 8 – 2013 ; Barneaud-Rocca, D. ; Etchebest, C. ; Guizouarn, H.
    Structural model of the anion exchanger 1 (SLC4A1) and identification of transmembrane segments forming the transport site
    J. BIOL. CHEM. ; 288 ; (37) 26372–26384 ; [google scholar] 
  • 9 – 2013 ; Rebehmed, J. ; Alphand, V. ; de Berardinis, V. ; de Brevern, A. G.
    Evolution study of the Baeyer-Villiger monooxygenases enzyme family: functional importance of the highly conserved residues
    BIOCHIMIE ; 95 ; (7) 1394–1402 ; [google scholar] 
  • 10 – 2013 ; Bhaskara, R. M. ; de Brevern, A. G. ; Srinivasan, N.
    Understanding the role of domain-domain linkers in the spatial orientation of domains in multi-domain proteins
    J. BIOMOL. STRUCT. DYN. ; 31 ; (12) 1467–1480 ; [google scholar] 
  • 11 – 2013 ; Baoukina, S. ; Monticelli, L. ; Tieleman, D. P.
    Interaction of pristine and functionalized carbon nanotubes with lipid membranes
    J PHYS CHEM B ; 117 ; (40) 12113–12123 ; [google scholar] 
  • 12 – 2013 ; Javanainen, M. ; Hammaren, H. ; Monticelli, L. ; Jeon, J. H. ; Miettinen, M. S. ; Martinez-Seara, H. ; Metzler, R. ; Vattulainen, I.
    Anomalous and normal diffusion of proteins and lipids in crowded lipid membranes
    FARADAY DISCUSS. ; 161 ; 397–417 ; [google scholar] 
  • 13 – 2013 ; Castillo, N. ; Monticelli, L. ; Barnoud, J. ; Tieleman, D. P.
    Free energy of WALP23 dimer association in DMPC, DPPC, and DOPC bilayers
    CHEM. PHYS. LIPIDS ; 169 ; 95–105 ; [google scholar] 
  • 14 – 2013 ; Monticelli, L. ; Tieleman, D. P.
    Force fields for classical molecular dynamics
    METHODS MOL. BIOL. ; 924 ; 197–213 ; [google scholar] 
  • 15 – 2013 ; Azouzi, S. ; Gueroult, M. ; Ripoche, P. ; Genetet, S. ; Colin Aronovicz, Y. ; Le Van Kim, C. ; Etchebest, C. ; Mouro-Chanteloup, I.
    Energetic and molecular water permeation mechanisms of the human red blood cell urea transporter B
    PLOS ONE ; 8 ; (12) e82338 ; [google scholar] 
  • 16 – 2013 ; Manoharan, M. ; Ng Fuk Chong, M. ; Vaitinadapoule, A. ; Frumence, E. ; Sowdhamini, R. ; Offmann, B.
    Comparative genomics of odorant binding proteins in Anopheles gambiae, Aedes aegypti, and Culex quinquefasciatus
    GENOME BIOL EVOL ; 5 ; (1) 163–180 ; [google scholar] 




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