C-terminal-binding protein 1 (CTBP1)

The protein contains 440 amino acids for an estimated molecular weight of 47535 Da.

 

Corepressor targeting diverse transcription regulators such as GLIS2 or BCL6. Has dehydrogenase activity. Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex. Functions in brown adipose tissue (BAT) differentiation. (updated: April 1, 2015)

Protein identification was indicated in the following studies:

  1. Goodman and co-workers. (2013) The proteomics and interactomics of human erythrocytes. Exp Biol Med (Maywood) 238(5), 509-518.
  2. Hegedűs and co-workers. (2015) Inconsistencies in the red blood cell membrane proteome analysis: generation of a database for research and diagnostic applications. Database (Oxford) 1-8.
  3. D'Alessandro and co-workers. (2017) Red blood cell proteomics update: is there more to discover? Blood Transfus. 15(2), 182-187.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

Interpro domains
Total structural coverage: 78%
Model score: 23

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VariantDescription
HADDTS

The reference OMIM entry for this protein is 602618

C-terminal-binding protein 1; ctbp1

CLONING

The E1a region of group C adenoviruses encodes 2 nearly identical proteins that are largely responsible for the oncogenic properties of adenoviruses. Whereas the N-terminal half of these E1A proteins is sufficient for transformation, the C-terminal half appears to modulate transformation, tumorigenesis, and metastasis negatively. Boyd et al. (1993) purified a HeLa cell protein, designated CTBP1, that specifically binds to the C-terminal half of E1A proteins. CTBP1 is a phosphoprotein that migrates as a 48-kD doublet by SDS-PAGE. Katsanis and Fisher (1998) suggested that the doublet consists of CTBP1 and the closely related CTBP2 (602619). Schaeper et al. (1995) independently isolated a CTBP1 cDNA from a B-cell library. The predicted 439-amino acid sequence contains the sequences of 2 peptides prepared from purified CTBP1. The authors coimmunoprecipitated CTPB1 and an E1A protein from extracts of mammalian cells that were expressing both proteins. Furusawa et al. (1999) identified the mouse homologs of CTBP1 and CTBP2 in a yeast 2-hybrid screen for proteins that interact with delta-EF1 (TCF8; 189909), a transcriptional repressor that binds the E2-box (CACCTG) and related sequences. Using 2-hybrid and direct binding assays, they concluded that CtBP1 binds to the short medial portion of delta-EF1 containing the PLDLSL motif. In cotransfection experiments, they observed that CtBP1 enhanced the transrepression activity of delta-EF1. Using Northern blot analysis and in situ hybridization with mouse embryos, Furusawa et al. (1999) detected CtBP1 expression throughout developmental stages and in a wide range of adult tissues. CtBP1 and CtBP2 expression correlates with delta-EF1 expression. The authors hypothesized that CtBP1 and CtBP2 function as corepressors of delta-EF1 action.

GENE FUNCTION

Polycomb (Pc) is part of a Pc group (PcG) protein complex that is involved in repression of gene activity during Drosophila and vertebrate development. Using a yeast 2-hybrid assay, Sewalt et al. (1999) found that Xenopus Ctbp1 interacts with Xenopus Pc and that human CTBP2 interacts with PC2 (603079), a human Pc homolog. Immunofluorescence studies indicated that CTBP1 and CTBP2 partially colocalize with PC2 in large PcG domains in interphase nuclei. As with PC2, chimeric LexA-CTBP2 and LexA-CTBP1 proteins repressed gene activity when targeted to a reporter gene. Sewalt et al. (1999) suggested that PC2-mediated repression of gene expression involves an association with corepressors such as the CTBPs. They speculated that the interference of the adenoviral E1A protein with the transcription machinery of the infected cell may involve interference with PcG-mediated repression through disruption of the CTBP-PcG interaction. Northern blot analysis revealed that the CTBP1 gene was expressed as a 2.4-kb mRNA in all human tissues tested. Pc2 recruits the transcriptional corepressor CTBP to PcG bodies. Kagey et al. (2003) showed that CTBP is sumoylated at a single lysine. In vitro, CTBP sumoylation minimally required the SUMO E1 and E2 (UBC9; 601661) and SUMO1 (601912). However, Pc2 dramatically enhanced CTBP sumoylation. The authors proposed that, in vivo, this is likely due to the ability of Pc2 to recruit both CTBP and UBC9 to PcG bodies, thereby bringing together substrate and E2 and stimulating the transfer of SUMO to CTBP. These results demonstrated that Pc2 is a SUMO E3 and suggested that PcG bodies may be sumoylation centers. ... More on the omim web site

Subscribe to this protein entry history

Feb. 2, 2018: Protein entry updated
Automatic update: Uniprot description updated

Dec. 19, 2017: Protein entry updated
Automatic update: Uniprot description updated

Nov. 23, 2017: Protein entry updated
Automatic update: Uniprot description updated

June 20, 2017: Protein entry updated
Automatic update: comparative model was added.

March 16, 2016: Protein entry updated
Automatic update: OMIM entry 602618 was added.