Anoctamin-6 (ANO6)

The protein contains 910 amino acids for an estimated molecular weight of 106165 Da.

 

Small-conductance calcium-activated nonselective cation (SCAN) channel which acts as a regulator of phospholipid scrambling in platelets and osteoblasts. Phospholipid scrambling results in surface exposure of phosphatidylserine which in platelets is essential to trigger the clotting system whereas in osteoblasts is essential for the deposition of hydroxyapatite during bone mineralization. Has calcium-dependent phospholipid scramblase activity; scrambles phosphatidylserine, phosphatidylcholine and galactosylceramide (By similarity). Can generate outwardly rectifying chloride channel currents in airway epithelial cells and Jurkat T lymphocytes. (updated: Oct. 10, 2018)

Protein identification was indicated in the following studies:

  1. Bryk and co-workers. (2017) Quantitative Analysis of Human Red Blood Cell Proteome. J Proteome Res. 16(8), 2752-2761.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

This protein is annotated as membranous in Gene Ontology, is annotated as membranous in UniProt, is predicted to be membranous by TOPCONS.


Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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VariantDescription
dbSNP:rs2162321

The reference OMIM entry for this protein is 262890

Scott syndrome; scts
Bleeding disorder, platelet-type, 7; bdplt7
Bleeding abnormality due to deficiency of platelet binding of factor x
Prothrombin conversion defect, familial
Prothrombin consumption deficiency
Prothrombin consumption inhib

A number sign (#) is used with this entry because Scott syndrome (SCTS) can be caused by homozygous mutation in the TMEM16F gene on chromosome 12q12 (608663).

DESCRIPTION

Scott syndrome is a mild platelet-type bleeding disorder characterized by impaired surface exposure of procoagulant phosphatidylserine (PS) on platelets and other blood cells, following activation with Ca(2+)-elevating agents (Munnix et al., 2003).

CLINICAL FEATURES

In 4 generations of a family (with 1 instance of male-to-male transmission), Robinson et al. (1967) described a mild bleeding disorder with no spontaneous hemorrhage. Analysis of blood coagulation in 2 generations revealed normal values for all clotting factors and other hemostatic systems except prothrombin consumption and thromboplastin inactivation. Robinson et al. (1967) demonstrated the presence of what they termed an 'inactivator' of active factor X (F10; 613872) in the plasma of these patients which accelerated the decay of blood thromboplastin. The inhibitor resembled that commonly observed in systemic lupus erythematosus; a similar agent was found in normal plasma but in much smaller amounts. Parry et al. (1980) studied 10 individuals from 3 unrelated Welsh families who had reduced prothrombin conversion as shown by a grossly abnormal prothrombin consumption index (PCI). Male-to-male transmission was reported. All known plasma coagulation factors were present in adequate concentrations; some affected persons had mild postoperative or postpartum bleeding but none suffered spontaneous bleeding. In therapeutic trials both plasma and platelet transfusions were needed to correct the abnormality. This finding, together with in vitro and other in vivo studies, suggested to Parry et al. (1980) that the abnormality was associated with an inhibitor of the interaction between plasma and phospholipid during blood coagulation. Parry et al. (1980) considered the abnormality similar but not identical to that in several members of the family reported by Robinson et al. (1967). Weiss (1994) reviewed the disorder of platelet coagulant activity known as Scott syndrome. Kojima et al. (1994) demonstrated that the coagulant nonresponder phenotype observed in platelets and erythrocytes in Scott syndrome is expressed by all of the EBV-transformed lymphoblasts derived from the B cells of the patient, and that the unique phenotype of the defective cells can be isolated by single cell cloning and propagated in culture through many generations. The continuous expression of the aberrant phenotype through in vitro culture confirmed that the Scott syndrome defect represents a gene deletion or mutation that is passed to daughter cells through mitosis. Furthermore, they demonstrated by heterokaryon hybridoma fusion that the abnormal Scott phenotype can be corrected by fusion with a cell exhibiting the normal coagulant-responder phenotype, and that the normal phenotype is sustained when these hybridomas are subsequently propagated through many generations. Taken together with the results of previous studies, these data suggested that the cellular defect in Scott syndrome reflects a mutation or deletion of a gene required for normal Ca(2+)-dependent transbilayer migration of phosphatidylserine to the plasma membrane surface and that this defect is shared among the blood cells of lymphoid, megakaryocytic, and erythroid lineages. Toti et al. (1996) characterized a familial instance of Scott syndrome and confirmed ... More on the omim web site

Subscribe to this protein entry history

May 12, 2019: Protein entry updated
Automatic update: OMIM entry 262890 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).