Glypican-1 (GPC1)

The protein contains 558 amino acids for an estimated molecular weight of 61680 Da.

 

Cell surface proteoglycan that bears heparan sulfate. Binds, via the heparan sulfate side chains, alpha-4 (V) collagen and participates in Schwann cell myelination (By similarity). May act as a catalyst in increasing the rate of conversion of prion protein PRPN(C) to PRNP(Sc) via associating (via the heparan sulfate side chains) with both forms of PRPN, targeting them to lipid rafts and facilitating their interaction. Required for proper skeletal muscle differentiation by sequestering FGF2 in lipid rafts preventing its binding to receptors (FGFRs) and inhibiting the FGF-mediated signaling. (updated: Oct. 10, 2018)

Protein identification was indicated in the following studies:

  1. D'Alessandro and co-workers. (2017) Red blood cell proteomics update: is there more to discover? Blood Transfus. 15(2), 182-187.

Methods

The following articles were analysed to gather the proteome content of erythrocytes.

The gene or protein list provided in the studies were processed using the ID mapping API of Uniprot in September 2018. The number of proteins identified and mapped without ambiguity in these studies is indicated below.
Only Swiss-Prot entries (reviewed) were considered for protein evidence assignation.

PublicationIdentification 1Uniprot mapping 2Not mapped /
Obsolete
TrEMBLSwiss-Prot
Goodman (2013)2289 (gene list)227853205992269
Lange (2014)123412347281224
Hegedus (2015)2638262202352387
Wilson (2016)165815281702911068
d'Alessandro (2017)18261817201815
Bryk (2017)20902060101081942
Chu (2018)18531804553621387

1 as available in the article and/or in supplementary material
2 uniprot mapping returns all protein isoforms as one entry

The compilation of older studies can be retrieved from the Red Blood Cell Collection database.

The data and differentiation stages presented below come from the proteomic study and analysis performed by our partners of the GReX consortium, more details are available in their published work.

No sequence conservation computed yet.

This protein is annotated as membranous in Gene Ontology, is annotated as membranous in UniProt, is predicted to be membranous by TOPCONS.


Interpro domains
Total structural coverage: 0%
Model score: 0
No model available.

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VariantDescription
a breast cancer sample; somatic mutation
dbSNP:rs2228331

The reference OMIM entry for this protein is 600395

Glypican 1; gpc1

DESCRIPTION

Cell surface heparan sulfate proteoglycans are composed of a membrane-associated protein core substituted with a variable number of heparan sulfate chains. Two different cell surface heparan sulfate proteoglycan families can be distinguished: the syndecan-like integral membrane proteoglycans (SLIPS), with a core protein spanning the cytoplasmic membrane, and the glypican-related integral membrane proteoglycans (GRIPS), with a core protein anchored to the cytoplasmic membrane via a glycosyl phosphatidylinositol. GPC1 belongs to the GRIPS family (Vermeesch et al., 1995).

GENE FUNCTION

Endostatin (120328), a collagen XVIII fragment, is a potent antiangiogenic protein. Karumanchi et al. (2001) showed that alkaline phosphatase-tagged endostatin bound endothelial cells, revealing 2 binding affinities. Expression cloning identified glypican, specifically glypican-1 or glypican-4 (GPC4; 300168), as the lower-affinity receptor. Biochemical and genetic studies indicated that the heparan sulfate glycosaminoglycans of glypican were critical for endostatin binding. Furthermore, endostatin selected a specific octasulfated hexasaccharide from a sequence in heparin. Karumanchi et al. (2001) also demonstrated a role for endostatin in renal tubular cell branching morphogenesis and showed that glypicans serve as low-affinity receptors for endostatin in these cells, as in endothelial cells. Antisense experiments suggested the critical importance of glypicans in mediating endostatin activities. Aikawa et al. (2008) found that both cancer cell-derived and host cell-derived GPC1 were crucial for efficient growth, metastasis, and angiogenesis of human and mouse cancer cells. Downregulation of GPC1 by antisense RNA in a human pancreatic cancer cell line resulted in prolonged doubling times and decreased anchorage-independent growth in vitro, as well as attenuated tumor growth, angiogenesis, and metastasis following transplant into athymic mice. Moreover, athymic mice lacking Gpc1 exhibited decreased tumor angiogenesis and metastases following intrapancreatic implantation with human pancreatic cancer cells and fewer pulmonary metastases following intravenous injection of mouse melanoma cells. Hepatic endothelial cells isolated from these mice exhibited an attenuated mitogenic response to Vegfa (VEGF; 192240). Using mass spectrometry analyses, Melo et al. (2015) identified a cell surface proteoglycan, GPC1, specifically enriched on cancer cell-derived exosomes. GPC1-positive circulating exosomes were monitored and isolated using flow cytometry from the serum of patients and mice with cancer. GPC1-positive circulating exosomes were detected in the serum of patients with pancreatic cancer with absolute specificity and sensitivity, distinguishing healthy subjects and patients with a benign pancreatic disease from patients with early- and late-stage pancreatic cancer. Levels of GPC1-positive circulating exosomes correlated with tumor burden and the survival of pre- and post-surgical patients. GPC1-positive circulating exosomes from patients and from mice with spontaneous pancreatic tumors carry specific KRAS (190070) mutations, and reliably detected pancreatic intraepithelial lesions in mice despite negative signals by MRI. Melo et al. (2015) concluded that GPC1-positive circulating exosomes may serve as a potential noninvasive diagnostic and screening tool to detect early stages of pancreatic cancer to facilitate possible curative s ... More on the omim web site

Subscribe to this protein entry history

June 30, 2020: Protein entry updated
Automatic update: OMIM entry 600395 was added.

Oct. 19, 2018: Additional information
Initial protein addition to the database. This entry was referenced in Bryk and co-workers. (2017).