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Sequences & 3D models

Below are fixed pre-compiled database outputs

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Agouti-related	Alpha-amylase inhibitor	Algae	Bacteria	Bug
Ciliate	Conotoxin1	Conotoxin2	Conotoxin3	Cyclotide
Fungi1	Fungi2	Gurmarin-like	Horseshoe crab	Insect1
Insect2	Maize	Metallocarboxypeptidase inhibitor	Mycetozoa	Plant antimicrobial
Plant defensin	Plant toxin	Plant toxin2	Scorpion1	Scorpion2
Serine protease inhibitor1	Serine protease inhibitor2	Serine protease inhibitor3	Spider	Sponge
Trematoda	Trichoplax	Virus1	Virus2	Water flea

Please note the link significations in the following table
	points at individual protein cards (sequence, "Colliers de Perles" ...)
Jmol	runs the Jmol viewing applet (loops '(a)', 'b', 'c', '(d)' and 'e' are colored green, salmon, aquamarine, light blue and pink, respectively
3D model	point at PDB files containing modeled 3D structures for download
	Note: superimposed PDBs and/or 3D models can be viewed (Jmol) using the checkboxes and the form below

Maize

9 sequences for Maize knottins

To display Sequence alignments OR Jmol Structural superimpositions of selected knottins:
1 - Use the checkboxes to make selection or use the 'Select All' button
2 - Choose either a 1D Sequence alignment or a 3D Structural superimposition

	Nomenclature	SwissProt	PDB	Family	Descriptor	Source	Tissue	Authors	PubMed
	Jmol (5)4.4(1)6	B6SME3_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MKGGKKEVAG AVVAILLVLQ LMAAPPTAMA ARSPHGAVPD GSLATTPKVT MLSATLCYTGETCKYIGCLT PACSCNYSDR LCYIIFTPVA
	Jmol (3)4.6(1)4	B6SPP3_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MECGSKKAAG GVLALLLLQL VLAPTTATAR LLQADTSTVV GLDIIAREFG HPVRGILCGETCVFLPCYTA AMGCQCIGQI CMM
	Jmol (5)4.4(1)6	B6SRH4_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MKGGKKEVAG AMVAILLVLQ LMAAPPTAMA ARSPHGAVPD GSLATTPKVT MLSATLCYTGETCKYIGCLT PACSCNYSDR LCYIIFTPVA
	Jmol (5)4.4(1)6	B6TPT0_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MKGGKKEVAG AVVAILLVLQ LMAAPPTAMA ARSPRGAVPD GSLATTPKVT MLSATLCYTGETCKYTPCFT PACSCSFSDR LCYVIFTPVA
	Jmol (3)4.6(1)4	B6TZ23_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MVAPTTATAR LLQADTSPVF GLDIIAREFG HPDGAIYCGE SCVLIPCISS VIGCRCENKVCVHRLKKPSS SLISLSRHLR AISCCFHDDP LCVKNQLHLL
	Jmol (3)4.6(1)4	B6U6T7_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MESASKKVAA GVLALLLLQL MVAPTTARLL QQADTSPVLG LDIMAREFGH PDGAIPCGESCVFIPCATSV FGCRCENKVC VHD
	Jmol (5)4.4(1)6	B6UAE2_MAIZE Pfam	3D model	Maize	Putative uncharacterized protein	Zea mays (Maize)	_	Alexandrov N.N., Brover V.V., Freidin S....	18937034
					MKGGKKEVAG AVVAILLVLQ LMAAPPTAMA ARSPHGAVPD GSLATTPKVT MLSATLCYTGETCKYTPCFT PACSCSFSDR LCYVIFTPVA
	Jmol (5)4.4(1)6	Q4KWL5_MAIZE Pfam	3D model	Maize	Putative cyclotide family protein	Zea mays (Maize)	_	Basse C.W.;Yu Y., Currie J., Lomeli R., ...	15980197
					MKGGKKEVAG AVVAILLVLQ LMAAPPTAMA ARSPRGAVPD GSLATTPKVT MLSATLCYTGETCKYIGCLT PACSCNYSDR LCYIIFTPVA
	Jmol (3)4.6(1)4	C5YPK7_SORBI Pfam	3D model	Maize	Uncharacterized protein	Sorghum bicolor	-	-	-
					MASGGGKRKP AAPVVAKTML LLLLQVMAAP TAVMAARTLQ GEDVLLYTTP VLGLNTIARE FGNPVACGES CVFIPCISSV VGCKCVNKAC YFMPSISS

To display Sequence alignments OR Jmol Structural superimpositions of selected knottins:
1 - Use the checkboxes to make selection or use the 'Select All' button
2 - Choose either a 1D Sequence alignment or a 3D Structural superimposition