2007

2007

Articles

  • 1 – 2007 ; Melquiond, A. ; Gelly, J. C. ; Mousseau, N. ; Derreumaux, P.
    Probing amyloid fibril formation of the NFGAIL peptide by computer simulations
    J CHEM PHYS ; 126 ; 065101 ; [google scholar] 
  • 2 – 2007 ; Bornot, Aurélie; Offmann, Bernard; de Brevern, Alexandre G.
    How flexible protein structures are ? New questions on the protein structure plasticity
    BIOFORUM EUROPE ; 11 ; 24-25 ; [google scholar] 
  • 3 – 2007 ; Thangudu, R. R. ; Sharma, P. ; Srinivasan, N. ; Offmann, B.
    Analycys: a database for conservation and conformation of disulphide bonds in homologous protein domains
    PROTEINS ; 67 ; 255–261 ; [google scholar] 
  • 4 – 2007 ; Atmane, N. ; Dairou, J. ; Flatters, D. ; Martins, M. ; Pluvinage, B. ; Derreumaux, P. ; Dupret, J. M. ; Rodrigues-Lima, F.
    The conserved glycine/alanine residue of the active-site loop containing the putative acetylCoA-binding motif is essential for the overall structural integrity of Mesorhizobium loti arylamine N-acetyltransferase 1
    BIOCHEM. BIOPHYS. RES. COMMUN. ; 361 ; 256–262 ; [google scholar] 
  • 5 – 2007 ; Heddi, B. ; Foloppe, N. ; Hantz, E. ; Hartmann, B.
    The DNA structure responds differently to physiological concentrations of K(+) or Na(+)
    J. MOL. BIOL. ; 368 ; 1403–1411 ; [google scholar] 
  • 6 – 2007 ; Etchebest, C.; Benros, C.; Bornot, A.; Camproux, A. C.; de Brevern, A. G.
    A reduced amino acid alphabet for understanding and designing protein adaptation to mutation
    EUR BIOPHYS J ; 36 ; (8) 1059-69 ; [google scholar] 
  • 7 – 2007 ; Doppelt, O.; Moriaud, F.; Bornot, A.; de Brevern, A. G.
    Functional annotation strategy for protein structures
    BIOINFORMATION ; 1 ; (9) 357-9 ; [google scholar] 
  • 8 – 2007 ; de Brevern, A. G.; Etchebest, C.; Benros, C.; Hazout, S.
    “Pinning strategy”: a novel approach for predicting the backbone structure in terms of protein blocks from sequence
    J BIOSCI ; 32 ; (1) 51-70 ; [google scholar] 
  • 9 – 2007 ; Offmann, B.; Tyagi, M.; de Brevern, A. G.
    Local Protein Structures
    CURRENT BIOINFORMATICS ; 3 ; 165-202 ; [google scholar] 
  • 10 – 2007 ; Pierre Poulain; Florent Calvo; Rodolphe Antoine; Michel Broyer; Philippe Dugourd
    Competition between secondary structures in gas phase polyalanines
    EUROPHYSICS LETTERS ; 79 ; 66003 ; [doi:10.1209/0295-5075/79/66003] [google scholar] 
  • 11 – 2007 ; Kaba, B. ; Pinet, N. ; Lelandais, G. ; Sigayret, A. ; Berry, A.
    Clustering gene expression data using graph separators
    IN SILICO BIOL. (GEDRUKT) ; 7 ; 433–452 ; [google scholar] 
  • 12 – 2007 ; Fardeau, V. ; Lelandais, G. ; Oldfield, A. ; Salin, H. ; Lemoine, S. ; Garcia, M. ; Tanty, V. ; Le Crom, S. ; Jacq, C. ; Devaux, F.
    The central role of PDR1 in the foundation of yeast drug resistance
    J. BIOL. CHEM. ; 282 ; 5063–5074 ; [google scholar] 
  • 13 – 2007 ; Ozdirekcan, S. ; Etchebest, C. ; Killian, J. A. ; Fuchs, P. F.
    On the orientation of a designed transmembrane peptide: toward the right tilt angle?
    J. AM. CHEM. SOC. ; 129 ; 15174–15181 ; [google scholar] 
  • 14 – 2007 ; Pham, V. L. ; Cadel, M. S. ; Gouzy-Darmon, C. ; Hanquez, C. ; Beinfeld, M. C. ; Nicolas, P. ; Etchebest, C. ; Foulon, T.
    Aminopeptidase B, a glucagon-processing enzyme: site directed mutagenesis of the Zn2+-binding motif and molecular modelling
    BMC BIOCHEM. ; 8 ; 21 ; [google scholar] 
  • 15 – 2007 ; Lacapère, J. J. ; Pebay-Peyroula, E. ; Neumann, J. M. ; Etchebest, C.
    Determining membrane protein structures: still a challenge!
    TRENDS BIOCHEM. SCI. ; 32 ; 259–270 ; [google scholar] 
  • 16 – 2007 ; Krisko, A. ; Etchebest, C.
    Theoretical model of human apolipoprotein B100 tertiary structure
    PROTEINS ; 66 ; 342–358 ; [google scholar] 
  • 17 – 2007 ; Jennifer Becq; Maria Cristina Gutierrez; Vania Rosas-Magallanes; Jean Rauzier; Brigitte Gicquel; Olivier Neyrolles; Patrick Deschavanne
    Contribution of horizontally acquired genomic islands to the evolution of the tubercle bacilli
    MOLECULAR BIOLOGY AND EVOLUTION ; 24 ; (8) 1861–71 ; [google scholar] 
  • 18 – 2007 ; Wong-Ekkabut, J. ; Xu, Z. ; Triampo, W. ; Tang, I. M. ; Tieleman, D. P. ; Monticelli, L.
    Effect of lipid peroxidation on the properties of lipid bilayers: a molecular dynamics study
    BIOPHYS. J. ; 93 ; 4225–4236 ; [google scholar] 
  • 19 – 2007 ; Baoukina, S. ; Monticelli, L. ; Marrink, S. J. ; Tieleman, D. P.
    Pressure-area isotherm of a lipid monolayer from molecular dynamics simulations
    LANGMUIR ; 23 ; 12617–12623 ; [google scholar] 
  • 20 – 2007 ; Baoukina, S. ; Monticelli, L. ; Amrein, M. ; Tieleman, D. P.
    The molecular mechanism of monolayer-bilayer transformations of lung surfactant from molecular dynamics simulations
    BIOPHYS. J. ; 93 ; 3775–3782 ; [google scholar] 
  • 21 – 2007 ; Leonenko, Z. ; Gill, S. ; Baoukina, S. ; Monticelli, L. ; Doehner, J. ; Gunasekara, L. ; Felderer, F. ; Rodenstein, M. ; Eng, L. M. ; Amrein, M.
    An elevated level of cholesterol impairs self-assembly of pulmonary surfactant into a functional film
    BIOPHYS. J. ; 93 ; 674–683 ; [google scholar] 


  • Incollections

  • 1 – 2007 ; Lelandais, G.; Le Crom, S.
    Cross-Species Comparison Using Expression Data
    Introduction to Systems Biology ; [google scholar] 
  • 2 – 2007 ; Fuchs, Patrick; Etchebest, Catherine; de Brevern, Alexandre G.
    Turns prediction
    Recent Adv. In Structural Bioinformatics ; Research signpost ; 1 ; [google scholar] 
  • 3 – 2007 ; Benros, Cristina; Martin, Juliette; Tyagi, Manoj; de Brevern, Alexandre G.
    Description of the local protein structure. I. Classical approaches
    Recent Research Developments in Protein Engineering ; Research Signpost ; [google scholar] 
  • 4 – 2007 ; Tyagi, Manoj; Benros, Cristina; Martin, Juliette; de Brevern, Alexandre G.
    Description of the local protein structure. II. Novel approaches.
    Recent Research Developments in Protein Engineering ; Research Signpost ; [google scholar] 
  • 5 – 2007 ; Debret, Gaelle; Etchebest, Catherine
    Insights into the Properties of Mechanosensitive Channel of Large Conductance (MscL)
    Recent Adv. In Structural Bioinformatics ; Research signpost ; 1 ; [google scholar] 


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