2008

2008

Articles

  • 1 – 2008 ; Gracy, J. ; Le-Nguyen, D. ; Gelly, J. C. ; Kaas, Q. ; Heitz, A. ; Chiche, L.
    KNOTTIN: the knottin or inhibitor cystine knot scaffold in 2007
    NUCLEIC ACIDS RES. ; 36 ; D314–319 ; [pmid:18025039] [doi:10.1093/nar/gkm939] [google scholar] 
  • 2 – 2008 ; Thangudu, R. R. ; Manoharan, M. ; Srinivasan, N. ; Cadet, F. ; Sowdhamini, R. ; Offmann, B.
    Analysis on conservation of disulphide bonds and their structural features in homologous protein domain families
    BMC STRUCT. BIOL. ; 8 ; 55 ; [google scholar] 
  • 3 – 2008 ; Reddy, C. C. ; Shameer, K. ; Offmann, B. O. ; Sowdhamini, R.
    PURE: a webserver for the prediction of domains in unassigned regions in proteins
    BMC BIOINFORMATICS ; 9 ; 281 ; [google scholar] 
  • 4 – 2008 ; Sandhya, S. ; Pankaj, B. ; Govind, M. K. ; Offmann, B. ; Srinivasan, N. ; Sowdhamini, R.
    CUSP: an algorithm to distinguish structurally conserved and unconserved regions in protein domain alignments and its application in the study of large length variations
    BMC STRUCT. BIOL. ; 8 ; 28 ; [google scholar] 
  • 5 – 2008 ; Heddi, B. ; Foloppe, N. ; Oguey, C. ; Hartmann, B.
    Importance of accurate DNA structures in solution: the Jun-Fos model
    J. MOL. BIOL. ; 382 ; 956–970 ; [google scholar] 
  • 6 – 2008 ; Tyagi, M.; de Brevern, A. G.; Srinivasan, N.; Offmann, B.
    Protein structure mining using a structural alphabet
    PROTEINS ; 71 ; (2) 920-37 ; [google scholar] 
  • 7 – 2008 ; Faure, G.; Bornot, A.; de Brevern, A. G.
    Protein contacts, inter-residue interactions and side-chain modelling
    BIOCHIMIE ; 90 ; (4) 626-39 ; [google scholar] 
  • 8 – 2008 ; Martin, J.; de Brevern, A. G.; Camproux, A. C.
    In silico local structure approach: a case study on outer membrane proteins
    PROTEINS ; 71 ; (1) 92-109 ; [google scholar] 
  • 9 – 2008 ; P. Poulain; A. Saladin; B. Hartmann; C. Prévost
    Insights on protein-DNA recognition by coarse grain modelling.
    JOURNAL OF COMPUTATIONAL CHEMISTRY ; 29 ; (15) 2582–2592 ; [pmid:18478582] [doi:10.1002/jcc.21014] [google scholar] 
  • 10 – 2008 ; Lelandais, G. ; Tanty, V. ; Geneix, C. ; Etchebest, C. ; Jacq, C. ; Devaux, F.
    Genome adaptation to chemical stress: clues from comparative transcriptomics in Saccharomyces cerevisiae and Candida glabrata
    GENOME BIOL. ; 9 ; R164 ; [google scholar] 
  • 11 – 2008 ; Salin, H. ; Fardeau, V. ; Piccini, E. ; Lelandais, G. ; Tanty, V. ; Lemoine, S. ; Jacq, C. ; Devaux, F.
    Structure and properties of transcriptional networks driving selenite stress response in yeasts
    BMC GENOMICS ; 9 ; 333 ; [google scholar] 
  • 12 – 2008 ; Banerjee, D. ; Lelandais, G. ; Shukla, S. ; Mukhopadhyay, G. ; Jacq, C. ; Devaux, F. ; Prasad, R.
    Responses of pathogenic and nonpathogenic yeast species to steroids reveal the functioning and evolution of multidrug resistance transcriptional networks
    EUKARYOTIC CELL ; 7 ; 68–77 ; [google scholar] 
  • 13 – 2008 ; Fagnot, I. ; Lelandais, G. ; Vialette, S.
    Bounded List Injective Homomorphism for Comparative Analysis of Protein-Protein Interaction Graphs
    JOURNAL OF DISCRETE ALGORITHMS ; 6 ; 178-191 ; [google scholar] 
  • 14 – 2008 ; Martin, J. ; Regad, L. ; Etchebest, C. ; Camproux, A. C.
    Taking advantage of local structure descriptors to analyze interresidue contacts in protein structures and protein complexes
    PROTEINS ; 73 ; 672–689 ; [google scholar] 
  • 15 – 2008 ; Debret, G. ; Valadié, H. ; Stadler, A. M. ; Etchebest, C.
    New insights of membrane environment effects on MscL channel mechanics from theoretical approaches
    PROTEINS ; 71 ; 1183–1196 ; [google scholar] 
  • 16 – 2008 ; Jichan Jang; Jennifer Becq; Brigitte Gicquel; Patrick Deschavanne; Olivier Neyrolles
    Horizontally acquired genomic islands in the tubercle bacilli
    TRENDS IN MICROBIOLOGY ; 16 ; (7) 303–8 ; [google scholar] 
  • 17 – 2008 ; Monticelli, L. ; Sorin, E. J. ; Tieleman, D. P. ; Pande, V. S. ; Colombo, G.
    Molecular simulation of multistate peptide dynamics: a comparison between microsecond timescale sampling and multiple shorter trajectories
    J COMPUT CHEM ; 29 ; 1740–1752 ; [google scholar] 
  • 18 – 2008 ; Baoukina, S. ; Monticelli, L. ; Risselada, H. J. ; Marrink, S. J. ; Tieleman, D. P.
    The molecular mechanism of lipid monolayer collapse
    PROC. NATL. ACAD. SCI. U.S.A. ; 105 ; 10803–10808 ; [google scholar] 
  • 19 – 2008 ; Wong-Ekkabut, J. ; Baoukina, S. ; Triampo, W. ; Tang, I. M. ; Tieleman, D. P. ; Monticelli, L.
    Computer simulation study of fullerene translocation through lipid membranes
    NAT NANOTECHNOL ; 3 ; 363–368 ; [google scholar] 
  • 20 – 2008 ; Monticelli, L.; Kandasamy, S. K.; Periole, X.; Larson, R. G.; Tieleman,D. P. ; Marrink, S. J.
    The MARTINI coarse grained force field: extension to proteins
    J. CHEM THEORY COMPUT ; 4 ; 819-834 ; [google scholar] 




  • Print Friendly, PDF & Email