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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:45:25
Total request time: 105.5 seconds.
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Sequence number: 1
Sequence name: sp|B2RUZ4|SMIM1_HUMAN Small integral membrane protein 1 OS=Homo sapiens GN=SMIM1 PE=1 SV=1
Sequence length: 78 aa.
Sequence:
MQPQESHVHYSRWEDGSRDGVSLGAVSSTEEASRCRRISQRLCTGKLGIAMKVLGGVALFWIIFILGYLTGYYVHKCK


TOPCONS predicted topology:
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OCTOPUS predicted topology:
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Philius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMooooooooooooo


PolyPhobius predicted topology:
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SCAMPI predicted topology:
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SPOCTOPUS predicted topology:
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Homology:
No homologous hits found



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 12.755
11 13.575
12 13.475
13 13.687
14 12.694
15 12.172
16 11.702
17 10.693
18 10.497
19 9.754
20 9.132
21 8.650
22 8.581
23 8.383
24 8.004
25 7.593
26 7.258
27 7.061
28 7.319
29 7.172
30 7.559
31 8.587
32 8.994
33 9.834
34 10.183
35 10.610
36 11.035
37 10.734
38 9.720
39 9.537
40 8.099
41 7.037
42 6.453
43 5.797
44 5.392
45 4.741
46 4.849
47 5.033
48 4.989
49 4.556
50 3.565
51 3.107
52 3.075
53 2.609
54 2.062
55 1.078
56 0.483
57 0.046
58 -0.272
59 -0.513
60 -1.130
61 -1.314
62 -1.202
63 -1.145
64 -0.829
65 -1.007
66 -0.393
67 0.371
68 1.122
69 2.587

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	100.00
12	100.00
13	100.00
14	100.00
15	100.00
16	100.00
17	100.00
18	100.00
19	100.00
20	100.00
21	100.00
22	100.00
23	100.00
24	100.00
25	100.00
26	100.00
27	100.00
28	100.00
29	100.00
30	100.00
31	100.00
32	100.00
33	100.00
34	100.00
35	100.00
36	100.00
37	100.00
38	99.05
39	97.14
40	96.19
41	95.24
42	94.29
43	94.29
44	94.29
45	94.29
46	94.29
47	94.29
48	94.29
49	94.29
50	94.29
51	94.29
52	94.29
53	94.29
54	94.29
55	94.29
56	93.33
57	92.38
58	91.43
59	91.43
60	92.38
61	91.43
62	90.48
63	89.52
64	88.57
65	88.57
66	88.57
67	88.57

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