############################################################################## TOPCONS2 result file Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:34:24 Total request time: 8.5 seconds. ############################################################################## Sequence number: 1 Sequence name: sp|O14791|APOL1_HUMAN Apolipoprotein L1 OS=Homo sapiens GN=APOL1 PE=1 SV=5 Sequence length: 398 aa. Sequence: MEGAALLRVSVLCIWMSALFLGVGVRAEEAGARVQQNVPSGTDTGDPQSKPLGDWAAGTMDPESSIFIEDAIKYFKEKVSTQNLLLLLTDNEAWNGFVAAAELPRNEADELRKALDNLARQMIMKDKNWHDKGQQYRNWFLKEFPRLKSELEDNIRRLRALADGVQKVHKGTTIANVVSGSLSISSGILTLVGMGLAPFTEGGSLVLLEPGMELGITAALTGITSSTMDYGKKWWTQAQAHDLVIKSLDKLKEVREFLGENISNFLSLAGNTYQLTRGIGKDIRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSILEMSRGVKLTDVAPVSFFLVLDVVYLVYESKHLHEGAKSETAEELKKVAQELEEKLNILNNNYKILQADQEL TOPCONS predicted topology: iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooo OCTOPUS predicted topology: iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooo Philius predicted topology: SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo PolyPhobius predicted topology: iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMoooMMMMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooo SCAMPI predicted topology: oooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooo SPOCTOPUS predicted topology: iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooo Homology: No homologous hits found Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G) 10 1.408 11 0.846 12 -0.430 13 -0.543 14 -0.569 15 -0.205 16 0.251 17 0.668 18 0.645 19 1.458 20 1.816 21 2.128 22 3.107 23 3.654 24 4.375 25 5.105 26 6.027 27 6.763 28 7.779 29 8.552 30 9.606 31 10.792 32 10.948 33 11.101 34 11.304 35 11.256 36 11.292 37 11.547 38 11.431 39 11.342 40 12.047 41 12.548 42 13.447 43 13.528 44 14.027 45 14.112 46 13.407 47 12.864 48 12.719 49 12.341 50 11.764 51 11.247 52 11.366 53 11.078 54 11.285 55 11.156 56 10.988 57 10.137 58 9.235 59 8.484 60 8.562 61 8.113 62 8.265 63 7.770 64 7.655 65 7.863 66 7.573 67 7.913 68 8.630 69 9.338 70 9.930 71 10.626 72 10.668 73 10.793 74 11.511 75 10.953 76 10.692 77 10.279 78 9.294 79 7.361 80 6.206 81 6.083 82 6.498 83 6.524 84 6.498 85 6.373 86 6.347 87 6.199 88 5.755 89 5.942 90 5.747 91 5.809 92 5.499 93 5.780 94 5.823 95 6.302 96 6.287 97 7.073 98 7.878 99 7.776 100 8.074 101 8.699 102 8.436 103 9.255 104 10.456 105 10.337 106 10.250 107 11.252 108 12.296 109 12.364 110 12.618 111 12.720 112 12.395 113 12.592 114 11.796 115 11.253 116 10.258 117 9.688 118 9.829 119 10.077 120 9.259 121 10.020 122 10.464 123 10.581 124 11.153 125 12.347 126 13.133 127 12.903 128 13.584 129 14.507 130 14.379 131 13.597 132 13.026 133 13.168 134 13.493 135 12.894 136 12.989 137 12.570 138 11.413 139 11.391 140 10.845 141 10.725 142 10.096 143 10.558 144 10.710 145 10.997 146 11.298 147 11.386 148 10.673 149 10.405 150 10.288 151 10.395 152 9.715 153 9.358 154 10.388 155 10.716 156 11.002 157 11.689 158 11.498 159 10.576 160 9.903 161 9.991 162 9.178 163 8.699 164 8.408 165 8.557 166 8.693 167 9.293 168 9.653 169 9.546 170 9.552 171 9.822 172 9.710 173 8.528 174 8.114 175 7.359 176 6.446 177 6.164 178 6.251 179 5.276 180 4.702 181 4.427 182 3.950 183 3.812 184 4.095 185 3.935 186 3.412 187 3.065 188 2.997 189 2.991 190 2.424 191 2.167 192 3.348 193 3.363 194 3.906 195 4.307 196 3.816 197 3.737 198 3.746 199 3.714 200 4.447 201 5.258 202 5.534 203 5.199 204 5.856 205 5.197 206 5.725 207 5.573 208 5.079 209 5.422 210 5.387 211 4.379 212 3.983 213 3.812 214 3.415 215 3.686 216 3.952 217 4.529 218 4.758 219 4.210 220 4.264 221 4.000 222 4.415 223 4.521 224 5.782 225 5.944 226 6.429 227 6.984 228 8.125 229 8.868 230 10.364 231 10.996 232 11.537 233 12.050 234 11.444 235 10.584 236 9.487 237 9.064 238 8.882 239 7.699 240 7.788 241 7.609 242 7.249 243 7.799 244 9.416 245 10.178 246 10.546 247 11.277 248 11.259 249 10.610 250 10.949 251 11.157 252 11.224 253 11.379 254 11.506 255 11.847 256 10.849 257 9.657 258 9.747 259 8.322 260 7.602 261 7.790 262 7.958 263 7.087 264 6.923 265 7.377 266 6.230 267 6.634 268 7.020 269 7.234 270 6.502 271 6.465 272 7.139 273 7.523 274 7.436 275 8.174 276 8.949 277 8.397 278 8.604 279 8.404 280 7.872 281 7.317 282 7.572 283 8.712 284 8.280 285 9.437 286 10.207 287 10.308 288 10.197 289 10.582 290 9.600 291 8.919 292 8.015 293 7.956 294 7.475 295 7.539 296 7.745 297 7.738 298 7.885 299 8.906 300 9.868 301 10.296 302 10.687 303 11.399 304 11.483 305 11.384 306 11.436 307 11.213 308 10.532 309 10.201 310 10.476 311 10.381 312 9.970 313 10.600 314 11.195 315 11.979 316 12.645 317 12.882 318 12.066 319 12.305 320 12.391 321 12.242 322 11.763 323 10.679 324 9.849 325 9.487 326 8.170 327 7.698 328 8.353 329 8.168 330 8.548 331 9.111 332 8.723 333 8.312 334 7.555 335 6.862 336 6.302 337 6.237 338 4.878 339 4.843 340 4.001 341 3.645 342 2.975 343 2.232 344 1.737 345 1.831 346 2.585 347 2.665 348 3.200 349 4.273 350 3.846 351 4.776 352 5.694 353 6.909 354 7.645 355 8.490 356 9.198 357 10.316 358 10.195 359 10.343 360 11.113 361 11.771 362 11.772 363 12.204 364 12.636 365 12.046 366 11.902 367 12.455 368 12.699 369 13.115 370 13.515 371 13.876 372 13.874 373 13.622 374 14.040 375 13.413 376 12.182 377 12.410 378 12.813 379 12.321 380 11.407 381 11.690 382 11.108 383 10.436 384 10.860 385 10.843 386 10.583 387 10.533 388 11.767 389 10.765 Predicted TOPCONS reliability (left column=sequence position; right column=reliability) 11 60.00 12 60.00 13 60.00 14 60.00 15 60.95 16 61.90 17 62.86 18 63.81 19 64.76 20 65.71 21 66.67 22 67.62 23 68.57 24 69.52 25 70.48 26 71.43 27 72.38 28 73.33 29 74.29 30 75.24 31 76.19 32 77.14 33 78.10 34 79.05 35 80.00 36 80.00 37 80.00 38 80.00 39 80.00 40 80.00 41 80.00 42 80.00 43 80.00 44 80.00 45 80.00 46 80.00 47 80.00 48 80.00 49 80.00 50 80.00 51 80.00 52 80.00 53 80.00 54 80.00 55 80.00 56 80.00 57 80.00 58 80.00 59 80.00 60 80.00 61 80.00 62 80.00 63 80.00 64 80.00 65 80.00 66 80.00 67 80.00 68 80.00 69 80.00 70 80.00 71 80.00 72 80.00 73 80.00 74 80.00 75 80.00 76 80.00 77 80.00 78 80.00 79 80.00 80 80.00 81 80.00 82 80.00 83 80.00 84 80.00 85 80.00 86 80.00 87 80.00 88 80.00 89 80.00 90 80.00 91 80.00 92 80.00 93 80.00 94 80.00 95 80.00 96 80.00 97 80.00 98 80.00 99 80.00 100 80.00 101 80.00 102 80.00 103 80.00 104 80.00 105 80.00 106 80.00 107 80.00 108 80.00 109 80.00 110 80.00 111 80.00 112 80.00 113 80.00 114 80.00 115 80.00 116 80.00 117 80.00 118 80.00 119 80.00 120 80.00 121 80.00 122 80.00 123 80.00 124 80.00 125 80.00 126 80.00 127 80.00 128 80.00 129 80.00 130 80.00 131 80.00 132 80.00 133 80.00 134 80.00 135 80.00 136 80.00 137 80.00 138 80.00 139 80.00 140 80.00 141 80.00 142 80.00 143 80.00 144 80.00 145 80.00 146 80.00 147 80.00 148 80.00 149 80.00 150 80.00 151 80.00 152 80.00 153 80.00 154 80.00 155 80.00 156 80.00 157 80.00 158 80.00 159 80.00 160 80.00 161 80.00 162 80.00 163 80.00 164 80.00 165 80.00 166 80.00 167 78.10 168 76.19 169 76.19 170 76.19 171 76.19 172 76.19 173 76.19 174 76.19 175 76.19 176 76.19 177 76.19 178 76.19 179 76.19 180 76.19 181 76.19 182 76.19 183 76.19 184 76.19 185 76.19 186 76.19 187 76.19 188 77.14 189 78.10 190 79.05 191 78.10 192 77.14 193 76.19 194 75.24 195 75.24 196 75.24 197 75.24 198 75.24 199 75.24 200 75.24 201 75.24 202 75.24 203 75.24 204 75.24 205 75.24 206 75.24 207 75.24 208 75.24 209 76.19 210 77.14 211 76.19 212 75.24 213 74.29 214 73.33 215 72.38 216 71.43 217 70.48 218 70.48 219 70.48 220 70.48 221 70.48 222 70.48 223 70.48 224 70.48 225 70.48 226 70.48 227 70.48 228 70.48 229 70.48 230 70.48 231 70.48 232 70.48 233 72.38 234 74.29 235 76.19 236 78.10 237 79.05 238 80.00 239 80.00 240 80.00 241 80.00 242 80.00 243 80.00 244 80.00 245 80.00 246 80.00 247 80.00 248 80.00 249 80.00 250 80.00 251 80.00 252 80.00 253 80.00 254 80.00 255 80.00 256 80.00 257 80.00 258 80.00 259 80.00 260 80.00 261 80.00 262 80.00 263 80.00 264 80.00 265 80.00 266 80.00 267 80.00 268 80.00 269 80.00 270 80.00 271 80.00 272 80.00 273 80.00 274 80.00 275 80.00 276 80.00 277 80.00 278 80.00 279 80.00 280 80.00 281 80.00 282 80.00 283 80.00 284 80.00 285 80.00 286 80.00 287 80.00 288 80.00 289 80.00 290 80.00 291 80.00 292 80.00 293 80.00 294 80.00 295 80.00 296 80.00 297 80.00 298 80.00 299 80.00 300 80.00 301 80.00 302 80.00 303 80.00 304 80.00 305 80.00 306 80.00 307 80.00 308 80.00 309 80.00 310 80.00 311 80.00 312 80.00 313 80.00 314 80.00 315 80.00 316 80.00 317 80.00 318 80.00 319 80.00 320 80.00 321 80.00 322 80.00 323 79.05 324 78.10 325 78.10 326 78.10 327 78.10 328 78.10 329 78.10 330 78.10 331 78.10 332 78.10 333 78.10 334 78.10 335 78.10 336 78.10 337 78.10 338 78.10 339 78.10 340 78.10 341 78.10 342 78.10 343 78.10 344 80.00 345 81.90 346 82.86 347 83.81 348 84.76 349 85.71 350 86.67 351 87.62 352 88.57 353 89.52 354 90.48 355 91.43 356 92.38 357 93.33 358 94.29 359 95.24 360 96.19 361 97.14 362 98.10 363 99.05 364 100.00 365 100.00 366 100.00 367 100.00 368 100.00 369 100.00 370 100.00 371 100.00 372 100.00 373 100.00 374 100.00 375 100.00 376 100.00 377 100.00 378 100.00 379 100.00 380 100.00 381 100.00 382 100.00 383 100.00 384 100.00 385 100.00 386 100.00 387 100.00 ##############################################################################