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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 02:32:32
Total request time: 9.6 seconds.
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Sequence number: 1
Sequence name: sp|O14828|SCAM3_HUMAN Secretory carrier-associated membrane protein 3 OS=Homo sapiens OX=9606 GN=SCAMP3 PE=1 SV=3
Sequence length: 347 aa.
Sequence:
MAQSRDGGNPFAEPSELDNPFQDPAVIQHRPSRQYATLDVYNPFETREPPPAYEPPAPAPLPPPSAPSLQPSRKLSPTEPKNYGSYSTQASAAAATAELLKKQEELNRKAEELDRRERELQHAALGGTATRQNNWPPLPSFCPVQPCFFQDISMEIPQEFQKTVSTMYYLWMCSTLALLLNFLACLASFCVETNNGAGFGLSILWVLLFTPCSFVCWYRPMYKAFRSDSSFNFFVFFFIFFVQDVLFVLQAIGIPGWGFSGWISALVVPKGNTAVSVLMLLVALLFTGIAVLGIVMLKRIHSLYRRTGASFQKAQQEFAAGVFSNPAVRTAAANAAAGAAENAFRAP


TOPCONS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


OCTOPUS predicted topology:
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMiMMMMMMMMMMMMMMMoMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


Philius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


PolyPhobius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


SCAMPI predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


SPOCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMoMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii


Homology:
No homologous hits found



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 11.622
11 12.036
12 11.655
13 11.541
14 11.853
15 12.539
16 12.460
17 12.476
18 12.114
19 11.833
20 12.073
21 12.231
22 12.328
23 11.723
24 11.055
25 11.021
26 10.167
27 10.553
28 10.538
29 9.849
30 10.161
31 10.698
32 10.098
33 10.367
34 10.373
35 10.030
36 10.452
37 10.386
38 9.537
39 9.348
40 9.721
41 9.629
42 9.804
43 10.183
44 10.019
45 11.062
46 11.601
47 12.081
48 12.414
49 12.421
50 12.334
51 12.502
52 11.337
53 11.276
54 11.902
55 11.390
56 11.605
57 11.384
58 10.723
59 10.456
60 9.533
61 9.750
62 10.372
63 10.808
64 10.327
65 10.325
66 9.574
67 10.005
68 10.450
69 10.835
70 11.245
71 12.381
72 12.705
73 13.078
74 12.807
75 12.863
76 13.114
77 12.321
78 12.122
79 12.257
80 12.008
81 11.512
82 11.547
83 11.369
84 10.802
85 10.792
86 10.072
87 9.150
88 8.518
89 7.930
90 6.638
91 5.657
92 5.370
93 5.836
94 6.111
95 6.858
96 8.327
97 8.197
98 9.249
99 9.503
100 10.356
101 10.486
102 11.542
103 12.806
104 12.906
105 13.552
106 13.829
107 13.934
108 13.718
109 13.882
110 14.880
111 14.240
112 14.617
113 15.268
114 14.942
115 14.709
116 14.586
117 13.898
118 13.354
119 12.123
120 10.922
121 8.989
122 7.454
123 7.626
124 7.543
125 8.011
126 7.984
127 8.237
128 9.153
129 8.591
130 9.722
131 10.143
132 9.416
133 9.464
134 9.860
135 10.070
136 9.808
137 9.761
138 9.447
139 8.821
140 8.125
141 8.250
142 7.851
143 7.142
144 7.228
145 7.542
146 7.637
147 7.341
148 8.258
149 8.435
150 8.718
151 8.856
152 9.522
153 9.419
154 9.635
155 9.460
156 9.763
157 10.066
158 10.527
159 10.685
160 9.989
161 9.017
162 8.782
163 8.293
164 8.055
165 7.337
166 7.152
167 5.923
168 4.885
169 3.603
170 2.916
171 1.454
172 1.544
173 0.940
174 0.353
175 -0.177
176 -0.363
177 -0.644
178 -0.490
179 0.119
180 0.418
181 0.620
182 0.556
183 1.321
184 0.993
185 1.613
186 2.898
187 3.511
188 4.169
189 4.973
190 5.208
191 4.979
192 5.175
193 6.083
194 6.079
195 5.788
196 5.602
197 5.154
198 3.983
199 3.536
200 2.888
201 2.615
202 2.044
203 1.853
204 1.572
205 0.620
206 0.435
207 0.522
208 -0.017
209 0.123
210 -0.322
211 0.507
212 0.417
213 0.976
214 2.071
215 2.977
216 3.556
217 4.685
218 6.324
219 7.566
220 8.262
221 8.527
222 8.356
223 8.484
224 8.451
225 8.133
226 7.964
227 7.480
228 6.594
229 5.623
230 4.475
231 3.679
232 2.907
233 2.055
234 2.095
235 2.396
236 2.193
237 1.490
238 0.844
239 0.536
240 0.093
241 1.016
242 0.646
243 1.139
244 1.789
245 1.760
246 2.524
247 2.967
248 2.788
249 2.997
250 2.834
251 3.150
252 3.468
253 2.670
254 2.317
255 2.865
256 3.448
257 3.574
258 3.639
259 3.955
260 3.676
261 3.807
262 4.151
263 4.555
264 4.813
265 4.582
266 4.537
267 5.318
268 5.138
269 5.355
270 5.439
271 4.941
272 4.875
273 4.636
274 3.902
275 2.999
276 2.536
277 1.717
278 1.270
279 0.631
280 0.120
281 -0.279
282 -1.012
283 -1.245
284 -0.859
285 -0.898
286 -1.307
287 -1.317
288 -1.561
289 -1.361
290 -0.953
291 -0.686
292 0.192
293 0.974
294 1.659
295 2.474
296 3.328
297 4.012
298 4.408
299 5.438
300 5.981
301 6.751
302 7.266
303 7.993
304 8.796
305 9.067
306 9.544
307 10.311
308 10.353
309 9.882
310 9.672
311 8.921
312 8.787
313 9.186
314 8.898
315 9.119
316 9.318
317 9.353
318 8.734
319 8.258
320 7.397
321 7.165
322 6.459
323 6.080
324 6.120
325 6.275
326 6.250
327 6.118
328 6.786
329 7.132
330 7.028
331 6.441
332 6.780
333 7.318
334 6.781
335 5.975
336 5.556
337 5.620
338 6.071

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	80.00
12	80.00
13	80.00
14	80.00
15	80.00
16	80.00
17	80.00
18	80.00
19	80.00
20	80.00
21	80.00
22	80.00
23	80.00
24	80.00
25	80.00
26	80.00
27	80.00
28	80.00
29	80.00
30	80.00
31	80.00
32	80.00
33	80.00
34	80.00
35	80.00
36	80.00
37	80.00
38	80.00
39	80.00
40	80.00
41	80.00
42	80.00
43	80.00
44	80.00
45	80.00
46	80.00
47	80.00
48	80.00
49	80.00
50	80.00
51	80.00
52	80.00
53	80.00
54	80.00
55	80.00
56	80.00
57	80.00
58	80.00
59	80.00
60	80.00
61	80.00
62	80.00
63	80.00
64	80.00
65	80.00
66	80.00
67	80.00
68	80.00
69	80.00
70	80.00
71	80.00
72	80.00
73	80.00
74	80.00
75	80.00
76	80.00
77	80.00
78	80.00
79	80.00
80	80.00
81	80.00
82	80.00
83	80.00
84	80.00
85	80.00
86	80.00
87	80.00
88	80.00
89	80.00
90	80.00
91	80.00
92	80.00
93	80.00
94	80.00
95	80.00
96	80.00
97	80.00
98	80.00
99	80.00
100	80.00
101	80.00
102	80.00
103	80.00
104	80.00
105	80.00
106	80.00
107	80.00
108	80.00
109	80.00
110	80.00
111	80.00
112	80.00
113	80.00
114	80.00
115	80.00
116	80.00
117	80.00
118	80.00
119	80.00
120	80.00
121	80.00
122	80.00
123	80.00
124	80.00
125	80.00
126	80.00
127	80.00
128	80.00
129	80.00
130	80.00
131	80.00
132	80.00
133	80.00
134	80.00
135	80.00
136	80.00
137	80.00
138	80.00
139	80.00
140	80.00
141	80.00
142	80.00
143	80.00
144	80.00
145	80.00
146	80.00
147	80.00
148	80.00
149	80.00
150	80.00
151	80.00
152	80.00
153	80.00
154	80.00
155	79.05
156	78.10
157	77.14
158	74.29
159	71.43
160	72.38
161	73.33
162	74.29
163	75.24
164	76.19
165	77.14
166	78.10
167	79.05
168	80.00
169	80.95
170	80.95
171	81.90
172	82.86
173	83.81
174	84.76
175	85.71
176	87.62
177	89.52
178	91.43
179	95.24
180	99.05
181	97.14
182	95.24
183	93.33
184	91.43
185	89.52
186	89.52
187	87.62
188	86.67
189	86.67
190	86.67
191	87.62
192	87.62
193	87.62
194	87.62
195	87.62
196	87.62
197	87.62
198	87.62
199	87.62
200	87.62
201	87.62
202	89.52
203	91.43
204	93.33
205	95.24
206	97.14
207	97.14
208	96.19
209	96.19
210	96.19
211	96.19
212	96.19
213	96.19
214	96.19
215	96.19
216	96.19
217	96.19
218	96.19
219	96.19
220	96.19
221	94.29
222	92.38
223	92.38
224	92.38
225	92.38
226	92.38
227	92.38
228	92.38
229	95.24
230	96.19
231	96.19
232	96.19
233	96.19
234	96.19
235	96.19
236	96.19
237	96.19
238	96.19
239	96.19
240	96.19
241	96.19
242	98.10
243	100.00
244	98.10
245	98.10
246	98.10
247	98.10
248	98.10
249	98.10
250	98.10
251	98.10
252	98.10
253	98.10
254	98.10
255	98.10
256	98.10
257	98.10
258	98.10
259	98.10
260	98.10
261	98.10
262	98.10
263	97.14
264	96.19
265	97.14
266	96.19
267	96.19
268	96.19
269	96.19
270	96.19
271	96.19
272	96.19
273	96.19
274	96.19
275	96.19
276	96.19
277	96.19
278	96.19
279	96.19
280	96.19
281	96.19
282	96.19
283	96.19
284	97.14
285	95.24
286	93.33
287	91.43
288	91.43
289	91.43
290	91.43
291	91.43
292	91.43
293	91.43
294	91.43
295	91.43
296	91.43
297	91.43
298	91.43
299	91.43
300	91.43
301	91.43
302	91.43
303	91.43
304	91.43
305	91.43
306	94.29
307	97.14
308	100.00
309	100.00
310	100.00
311	100.00
312	100.00
313	100.00
314	100.00
315	100.00
316	100.00
317	100.00
318	100.00
319	100.00
320	100.00
321	100.00
322	100.00
323	100.00
324	100.00
325	100.00
326	100.00
327	100.00
328	100.00
329	100.00
330	100.00
331	100.00
332	100.00
333	100.00
334	100.00
335	100.00
336	100.00

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