############################################################################## TOPCONS2 result file Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:44:23 Total request time: 7.6 seconds. ############################################################################## Sequence number: 1 Sequence name: sp|O15165|LRAD4_HUMAN Low-density lipoprotein receptor class A domain-containing protein 4 OS=Homo sapiens OX=9606 GN=LDLRAD4 PE=1 SV=1 Sequence length: 306 aa. Sequence: MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPNQSRRREDGLPQEGCLWPSDSAAPRLGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISASTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV TOPCONS predicted topology: oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii OCTOPUS predicted topology: oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii Philius predicted topology: iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo PolyPhobius predicted topology: ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii SCAMPI predicted topology: ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii SPOCTOPUS predicted topology: oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii Homology: No homologous hits found Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G) 10 7.762 11 7.770 12 7.735 13 7.243 14 7.475 15 7.252 16 7.126 17 6.491 18 5.887 19 6.001 20 5.481 21 5.008 22 5.244 23 5.032 24 5.012 25 5.392 26 5.403 27 6.240 28 6.750 29 6.861 30 7.204 31 7.530 32 8.107 33 8.736 34 9.969 35 12.030 36 13.429 37 14.798 38 14.984 39 14.413 40 14.538 41 14.268 42 13.806 43 13.049 44 12.532 45 12.099 46 11.423 47 11.175 48 11.301 49 10.712 50 9.888 51 9.836 52 9.654 53 9.810 54 8.912 55 9.063 56 8.223 57 8.296 58 9.186 59 9.472 60 9.229 61 8.820 62 7.710 63 6.567 64 5.743 65 4.961 66 4.003 67 3.184 68 2.745 69 2.404 70 1.148 71 0.355 72 -0.465 73 -0.455 74 -1.287 75 -0.992 76 -1.175 77 -1.809 78 -0.941 79 -0.133 80 0.027 81 0.529 82 0.908 83 1.789 84 2.521 85 3.290 86 4.409 87 4.900 88 5.363 89 6.588 90 7.088 91 7.877 92 9.057 93 9.940 94 10.399 95 10.712 96 10.944 97 10.268 98 10.285 99 11.008 100 11.648 101 11.892 102 12.735 103 14.192 104 15.484 105 15.723 106 15.731 107 14.724 108 12.891 109 12.198 110 11.153 111 10.065 112 9.615 113 9.135 114 8.989 115 9.165 116 9.206 117 8.418 118 8.557 119 8.234 120 8.881 121 8.958 122 8.386 123 7.669 124 7.915 125 7.950 126 8.477 127 8.283 128 7.650 129 6.960 130 6.950 131 6.874 132 7.072 133 7.763 134 8.288 135 9.696 136 11.186 137 11.274 138 11.308 139 11.186 140 10.072 141 9.885 142 9.162 143 7.558 144 7.489 145 6.911 146 6.913 147 7.676 148 8.757 149 8.964 150 9.361 151 10.323 152 10.225 153 9.965 154 9.785 155 10.027 156 10.861 157 10.719 158 10.620 159 10.079 160 9.900 161 10.307 162 10.549 163 9.892 164 9.925 165 9.364 166 8.819 167 8.451 168 8.755 169 9.585 170 9.597 171 10.066 172 10.640 173 10.666 174 10.252 175 10.291 176 10.891 177 11.201 178 11.867 179 11.628 180 11.146 181 11.772 182 11.438 183 10.864 184 11.312 185 11.138 186 11.076 187 11.395 188 11.446 189 11.057 190 11.898 191 11.510 192 11.873 193 12.091 194 12.354 195 12.241 196 11.479 197 11.260 198 11.033 199 11.760 200 11.696 201 13.030 202 13.186 203 12.940 204 12.316 205 11.015 206 10.527 207 10.324 208 10.610 209 9.672 210 10.064 211 9.677 212 9.438 213 8.677 214 8.025 215 7.601 216 7.424 217 7.361 218 7.139 219 7.016 220 6.421 221 6.859 222 7.347 223 7.706 224 8.097 225 8.456 226 8.531 227 8.442 228 8.669 229 9.104 230 8.596 231 8.957 232 9.014 233 9.037 234 9.305 235 9.118 236 9.419 237 9.253 238 8.726 239 8.632 240 8.914 241 8.736 242 8.969 243 9.500 244 9.727 245 9.803 246 9.819 247 10.471 248 10.966 249 11.051 250 10.828 251 11.206 252 11.744 253 11.737 254 11.870 255 11.531 256 10.995 257 11.017 258 10.369 259 8.838 260 8.578 261 8.681 262 8.686 263 8.329 264 8.978 265 9.962 266 9.796 267 10.216 268 10.593 269 11.193 270 11.554 271 11.358 272 10.523 273 10.700 274 10.395 275 11.204 276 11.504 277 12.422 278 13.418 279 12.724 280 12.331 281 12.106 282 11.896 283 11.301 284 10.559 285 10.790 286 9.908 287 9.996 288 9.904 289 9.563 290 9.763 291 9.977 292 9.792 293 10.776 294 11.032 295 11.996 296 11.700 297 11.920 Predicted TOPCONS reliability (left column=sequence position; right column=reliability) 11 80.00 12 80.00 13 80.00 14 80.00 15 80.00 16 80.00 17 80.00 18 80.00 19 80.00 20 80.00 21 80.00 22 80.00 23 80.00 24 80.00 25 80.00 26 80.00 27 80.00 28 80.00 29 80.00 30 80.00 31 80.00 32 80.00 33 80.00 34 80.00 35 80.00 36 80.00 37 80.00 38 80.00 39 80.00 40 80.00 41 80.00 42 80.00 43 80.00 44 80.00 45 80.00 46 80.00 47 80.00 48 80.00 49 80.00 50 80.00 51 80.00 52 80.00 53 80.00 54 80.00 55 79.05 56 79.05 57 80.00 58 80.95 59 81.90 60 82.86 61 83.81 62 84.76 63 85.71 64 86.67 65 87.62 66 88.57 67 89.52 68 90.48 69 91.43 70 92.38 71 93.33 72 94.29 73 95.24 74 96.19 75 97.14 76 99.05 77 97.14 78 96.19 79 95.24 80 94.29 81 93.33 82 92.38 83 91.43 84 90.48 85 89.52 86 88.57 87 87.62 88 86.67 89 85.71 90 84.76 91 83.81 92 82.86 93 81.90 94 80.95 95 80.00 96 79.05 97 78.10 98 80.00 99 80.00 100 80.00 101 80.00 102 80.00 103 80.00 104 80.00 105 80.00 106 80.00 107 80.00 108 80.00 109 80.00 110 80.00 111 80.00 112 80.00 113 80.00 114 80.00 115 80.00 116 80.00 117 80.00 118 80.00 119 80.00 120 80.00 121 80.00 122 80.00 123 80.00 124 80.00 125 80.00 126 80.00 127 80.00 128 80.00 129 80.00 130 80.00 131 80.00 132 80.00 133 80.00 134 80.00 135 80.00 136 80.00 137 80.00 138 80.00 139 80.00 140 80.00 141 80.00 142 80.00 143 80.00 144 80.00 145 80.00 146 80.00 147 80.00 148 80.00 149 80.00 150 80.00 151 80.00 152 80.00 153 80.00 154 80.00 155 80.00 156 80.00 157 80.00 158 80.00 159 80.00 160 80.00 161 80.00 162 80.00 163 80.00 164 80.00 165 80.00 166 80.00 167 80.00 168 80.00 169 80.00 170 80.00 171 80.00 172 80.00 173 80.00 174 80.00 175 80.00 176 80.00 177 80.00 178 80.00 179 80.00 180 80.00 181 80.00 182 80.00 183 80.00 184 80.00 185 80.00 186 80.00 187 80.00 188 80.00 189 80.00 190 80.00 191 80.00 192 80.00 193 80.00 194 80.00 195 80.00 196 80.00 197 80.00 198 80.00 199 80.00 200 80.00 201 80.00 202 80.00 203 80.00 204 80.00 205 80.00 206 80.00 207 80.00 208 80.00 209 80.00 210 80.00 211 80.00 212 80.00 213 80.00 214 80.00 215 80.00 216 80.00 217 80.00 218 80.00 219 80.00 220 80.00 221 80.00 222 80.00 223 80.00 224 80.00 225 80.00 226 80.00 227 80.00 228 80.00 229 80.00 230 80.00 231 80.00 232 80.00 233 80.00 234 80.00 235 80.00 236 80.00 237 80.00 238 80.00 239 80.00 240 80.00 241 80.00 242 80.00 243 80.00 244 80.00 245 80.00 246 80.00 247 80.00 248 80.00 249 80.00 250 80.00 251 80.00 252 80.00 253 80.00 254 80.00 255 80.00 256 80.00 257 80.00 258 80.00 259 80.00 260 80.00 261 80.00 262 80.00 263 80.00 264 80.00 265 80.00 266 80.00 267 80.00 268 80.00 269 80.00 270 80.00 271 80.00 272 80.00 273 80.00 274 80.00 275 80.00 276 80.00 277 80.00 278 80.00 279 80.00 280 80.00 281 80.00 282 80.00 283 80.00 284 80.00 285 80.00 286 80.00 287 80.00 288 80.00 289 80.00 290 80.00 291 80.00 292 80.00 293 80.00 294 80.00 295 80.00 ##############################################################################