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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:44:58
Total request time: 7.0 seconds.
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Sequence number: 1
Sequence name: sp|O95183|VAMP5_HUMAN Vesicle-associated membrane protein 5 OS=Homo sapiens OX=9606 GN=VAMP5 PE=1 SV=1
Sequence length: 116 aa.
Sequence:
MAGIELERCQQQANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENIRYRICVGLVVVGVLLIILIVLLVVFLPQSSDSSSAPRTQDAGIASGPGN


TOPCONS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooo


OCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooooooooo


Philius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


PolyPhobius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


SCAMPI predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooooo


SPOCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooooooooo


3hd7A:
----iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMM-MMMMMMMMM----------------------------



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 11.735
11 11.648
12 11.402
13 11.504
14 11.864
15 10.943
16 11.507
17 11.039
18 11.189
19 10.947
20 11.362
21 10.841
22 10.598
23 10.451
24 10.047
25 8.978
26 9.114
27 10.037
28 9.186
29 9.894
30 10.346
31 10.180
32 9.537
33 9.036
34 9.795
35 9.212
36 9.035
37 9.921
38 10.789
39 10.722
40 11.332
41 11.096
42 10.697
43 10.668
44 10.989
45 10.683
46 9.822
47 10.477
48 10.600
49 9.899
50 10.037
51 10.451
52 10.433
53 10.412
54 10.874
55 11.018
56 10.935
57 11.374
58 10.912
59 10.491
60 10.368
61 10.490
62 9.841
63 9.538
64 9.502
65 9.678
66 8.867
67 8.110
68 8.110
69 7.390
70 6.451
71 5.252
72 3.608
73 2.362
74 1.364
75 -0.314
76 -1.926
77 -2.219
78 -2.314
79 -2.564
80 -2.902
81 -2.861
82 -2.896
83 -3.134
84 -3.759
85 -2.913
86 -2.340
87 -1.868
88 -1.181
89 -0.524
90 0.510
91 1.925
92 3.480
93 4.488
94 5.715
95 6.652
96 7.257
97 8.185
98 9.253
99 9.895
100 10.601
101 10.735
102 11.163
103 11.934
104 11.784
105 11.661
106 11.159
107 10.687

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	100.00
12	100.00
13	100.00
14	100.00
15	100.00
16	100.00
17	100.00
18	100.00
19	100.00
20	100.00
21	100.00
22	100.00
23	100.00
24	100.00
25	100.00
26	100.00
27	100.00
28	100.00
29	100.00
30	100.00
31	100.00
32	100.00
33	100.00
34	100.00
35	100.00
36	100.00
37	100.00
38	100.00
39	100.00
40	100.00
41	100.00
42	100.00
43	100.00
44	100.00
45	100.00
46	100.00
47	100.00
48	100.00
49	100.00
50	100.00
51	100.00
52	100.00
53	100.00
54	100.00
55	100.00
56	100.00
57	100.00
58	100.00
59	100.00
60	98.10
61	98.10
62	98.10
63	98.10
64	98.10
65	98.10
66	98.10
67	98.10
68	98.10
69	98.10
70	98.10
71	98.10
72	98.10
73	98.10
74	98.10
75	98.10
76	98.10
77	98.10
78	98.10
79	98.10
80	98.10
81	98.10
82	96.19
83	94.29
84	94.29
85	94.29
86	94.29
87	94.29
88	94.29
89	94.29
90	94.29
91	94.29
92	94.29
93	94.29
94	94.29
95	94.29
96	94.29
97	94.29
98	94.29
99	94.29
100	94.29
101	94.29
102	96.19
103	98.10
104	100.00
105	100.00

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