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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:48:27
Total request time: 6.7 seconds.
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Sequence number: 1
Sequence name: sp|P63027|VAMP2_HUMAN Vesicle-associated membrane protein 2 OS=Homo sapiens GN=VAMP2 PE=1 SV=3
Sequence length: 116 aa.
Sequence:
MSATAATAPPAAPAGEGGPPAPPPNLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIILIIIIVYFST


TOPCONS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMo


OCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMo


Philius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMoo


PolyPhobius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMoo


SCAMPI predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMo


SPOCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMo


3hd7A:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMoo



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 8.085
11 8.774
12 8.495
13 8.952
14 9.615
15 10.284
16 10.896
17 10.702
18 10.789
19 10.645
20 10.745
21 10.841
22 10.865
23 10.111
24 10.735
25 11.214
26 10.901
27 11.677
28 11.991
29 12.525
30 12.370
31 12.756
32 12.942
33 12.041
34 11.252
35 10.919
36 11.039
37 10.767
38 10.283
39 9.430
40 9.700
41 9.479
42 10.065
43 9.794
44 9.522
45 9.385
46 9.901
47 10.011
48 9.872
49 10.468
50 10.520
51 9.840
52 10.591
53 11.902
54 11.629
55 12.460
56 13.086
57 13.124
58 12.948
59 12.619
60 12.516
61 11.712
62 12.037
63 12.214
64 13.001
65 12.253
66 12.332
67 12.065
68 10.773
69 10.602
70 10.382
71 9.667
72 8.623
73 8.497
74 8.077
75 7.347
76 7.660
77 7.813
78 7.890
79 8.237
80 8.624
81 8.195
82 8.822
83 9.602
84 9.931
85 10.597
86 10.593
87 11.141
88 10.535
89 10.023
90 8.613
91 7.985
92 6.911
93 5.301
94 4.428
95 3.033
96 1.941
97 0.834
98 0.078
99 -0.448
100 -0.923
101 -1.672
102 -2.681
103 -2.471
104 -2.930
105 -3.334
106 -2.928
107 -2.703

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	100.00
12	100.00
13	100.00
14	100.00
15	100.00
16	100.00
17	100.00
18	100.00
19	100.00
20	100.00
21	100.00
22	100.00
23	100.00
24	100.00
25	100.00
26	100.00
27	100.00
28	100.00
29	100.00
30	100.00
31	100.00
32	100.00
33	100.00
34	100.00
35	100.00
36	100.00
37	100.00
38	100.00
39	100.00
40	100.00
41	100.00
42	100.00
43	100.00
44	100.00
45	100.00
46	100.00
47	100.00
48	100.00
49	100.00
50	100.00
51	100.00
52	100.00
53	100.00
54	100.00
55	100.00
56	100.00
57	100.00
58	100.00
59	100.00
60	100.00
61	100.00
62	100.00
63	100.00
64	100.00
65	100.00
66	100.00
67	100.00
68	100.00
69	100.00
70	100.00
71	100.00
72	100.00
73	100.00
74	100.00
75	100.00
76	100.00
77	100.00
78	100.00
79	100.00
80	100.00
81	100.00
82	100.00
83	99.05
84	98.10
85	98.10
86	98.10
87	98.10
88	98.10
89	98.10
90	98.10
91	98.10
92	98.10
93	98.10
94	98.10
95	98.10
96	98.10
97	98.10
98	98.10
99	98.10
100	98.10
101	98.10
102	98.10
103	98.10
104	99.05
105	98.10

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