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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:52:11
Total request time: 7.0 seconds.
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Sequence number: 1
Sequence name: sp|Q9BV40|VAMP8_HUMAN Vesicle-associated membrane protein 8 OS=Homo sapiens GN=VAMP8 PE=1 SV=1
Sequence length: 100 aa.
Sequence:
MEEASEGGGNDRVRNLQSEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNVKMIVLICVIVFIIILFIVLFATGAFS


TOPCONS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooo


OCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooo


Philius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMoo


PolyPhobius predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMMo


SCAMPI predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooo


SPOCTOPUS predicted topology:
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooo


3hd7A:
-------iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMM------



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 13.086
11 13.605
12 14.238
13 14.096
14 13.971
15 13.529
16 13.177
17 12.134
18 11.239
19 10.506
20 10.095
21 10.061
22 10.140
23 11.054
24 11.152
25 10.556
26 10.336
27 9.682
28 9.117
29 8.702
30 9.453
31 9.634
32 9.276
33 10.056
34 10.787
35 9.844
36 9.899
37 10.295
38 10.400
39 9.791
40 10.128
41 11.017
42 10.547
43 11.796
44 12.557
45 13.450
46 13.836
47 14.425
48 14.579
49 13.259
50 12.667
51 12.658
52 11.566
53 11.035
54 11.768
55 12.039
56 11.523
57 11.510
58 11.612
59 11.165
60 10.812
61 10.898
62 9.825
63 9.898
64 10.387
65 10.346
66 10.312
67 10.030
68 10.342
69 10.033
70 9.222
71 8.521
72 7.471
73 6.236
74 4.909
75 3.892
76 2.599
77 1.484
78 0.262
79 -0.186
80 -1.033
81 -1.871
82 -2.623
83 -3.444
84 -3.950
85 -4.380
86 -4.255
87 -3.992
88 -3.615
89 -3.162
90 -3.191
91 -2.469

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	100.00
12	100.00
13	100.00
14	100.00
15	100.00
16	100.00
17	100.00
18	100.00
19	100.00
20	100.00
21	100.00
22	100.00
23	100.00
24	100.00
25	100.00
26	100.00
27	100.00
28	100.00
29	100.00
30	100.00
31	100.00
32	100.00
33	100.00
34	100.00
35	100.00
36	100.00
37	100.00
38	100.00
39	100.00
40	100.00
41	100.00
42	100.00
43	100.00
44	100.00
45	100.00
46	100.00
47	100.00
48	100.00
49	100.00
50	100.00
51	100.00
52	100.00
53	100.00
54	100.00
55	100.00
56	100.00
57	100.00
58	100.00
59	100.00
60	100.00
61	100.00
62	100.00
63	100.00
64	100.00
65	100.00
66	97.14
67	97.14
68	97.14
69	97.14
70	97.14
71	97.14
72	97.14
73	97.14
74	97.14
75	97.14
76	97.14
77	97.14
78	97.14
79	97.14
80	97.14
81	97.14
82	97.14
83	97.14
84	97.14
85	97.14
86	97.14
87	99.05
88	97.14
89	96.19

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