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TOPCONS2 result file
Generated from http://commonbackend.computenode.pcons3.se at 2018-10-26 16:43:24
Total request time: 5.6 seconds.
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Sequence number: 1
Sequence name: sp|Q9NZ42|PEN2_HUMAN Gamma-secretase subunit PEN-2 OS=Homo sapiens GN=PSENEN PE=1 SV=1
Sequence length: 101 aa.
Sequence:
MNLERVSNEEKLNLCRKYYLGGFAFLPFLWLVNIFWFFREAFLVPAYTEQSQIKGYVWRSAVGFLFWVIVLTSWITIFQIYRPRWGALGDYLSFTIPLGTP


TOPCONS predicted topology:
ooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


OCTOPUS predicted topology:
ooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


Philius predicted topology:
iiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiiii


PolyPhobius predicted topology:
ooooooooooooooooMMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


SCAMPI predicted topology:
iiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMoooooooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiii


SPOCTOPUS predicted topology:
ooooooooooooooooMMMMMMMMMMMMMMMMMMMMMiiiiiiiiiiiiiiiiiiiiMMMMMMMMMMMMMMMMMMMMMooooooooooooooooooooooo


Homology:
No homologous hits found



Predicted Delta-G-values (kcal/mol) (left column=sequence position; right column=Delta-G)

10 9.507
11 9.041
12 8.960
13 9.991
14 9.587
15 9.771
16 9.370
17 8.283
18 7.646
19 5.853
20 4.034
21 2.883
22 1.902
23 0.411
24 0.664
25 0.261
26 -0.081
27 -0.225
28 -0.318
29 -0.465
30 -0.193
31 0.372
32 0.223
33 0.567
34 0.436
35 0.978
36 2.050
37 2.116
38 2.551
39 3.030
40 3.490
41 4.101
42 4.405
43 4.444
44 4.906
45 5.814
46 6.871
47 7.495
48 7.944
49 7.785
50 7.114
51 7.489
52 7.854
53 8.164
54 8.618
55 7.984
56 7.819
57 7.515
58 6.927
59 5.623
60 4.318
61 2.995
62 1.187
63 0.663
64 0.512
65 -0.179
66 -0.378
67 -0.531
68 -0.591
69 -0.860
70 -0.502
71 -0.350
72 -0.202
73 -0.285
74 0.766
75 1.615
76 2.137
77 3.007
78 3.442
79 3.785
80 4.694
81 6.242
82 6.800
83 6.598
84 7.235
85 6.851
86 6.483
87 6.038
88 6.398
89 5.148
90 5.260
91 5.122
92 5.498

Predicted TOPCONS reliability (left column=sequence position; right column=reliability)

11	68.57
12	70.48
13	72.38
14	74.29
15	76.19
16	78.10
17	80.00
18	81.90
19	83.81
20	85.71
21	87.62
22	89.52
23	91.43
24	93.33
25	95.24
26	97.14
27	99.05
28	97.14
29	95.24
30	93.33
31	91.43
32	89.52
33	87.62
34	85.71
35	83.81
36	81.90
37	80.00
38	78.10
39	76.19
40	74.29
41	72.38
42	70.48
43	68.57
44	66.67
45	64.76
46	61.90
47	59.05
48	58.10
49	60.95
50	62.86
51	64.76
52	66.67
53	68.57
54	70.48
55	72.38
56	74.29
57	76.19
58	78.10
59	80.00
60	81.90
61	83.81
62	85.71
63	87.62
64	89.52
65	91.43
66	93.33
67	96.19
68	99.05
69	98.10
70	96.19
71	94.29
72	92.38
73	90.48
74	88.57
75	86.67
76	84.76
77	82.86
78	80.95
79	79.05
80	77.14
81	75.24
82	73.33
83	71.43
84	69.52
85	67.62
86	65.71
87	63.81
88	61.90
89	60.00
90	60.00

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