Knowledge-based algorithm to predict most probable backbone conformations for the protein local structures in terms of Protein Blocks.
A tool for the structural assessment of protein transmembrane domains.
ORION (Optimized protein fold RecognitION) is a sensitive method for protein template detection.
iPBA is a tool for protein structures mining and superimposition based on similarity in the local backbone conformation.
mulPBA is an efficient tool for comparison of protein structures based on similarity in the local backbone conformation.
Web-based protein structure analysis server using a structural alphabet.
PredyFlexy predicts from the sequence: (i) the series of Long Structural Prototypes (LSPs), a sophisticated structural alphabet and (ii) the protein flexibility, this last being defined from data coming from X-ray structures and molecular dynamics simulation
VLDP webserver is designed to determine protein contacts, accessibility and residue volume using Laguerre diagram.
A partitioning algorithm capable of producing multiple alternative domain assignments for a given protein structure.
An approach for splitting a 3D protein structure into compact fragments.
An approach for splitting a 3D protein structure into compact fragments
A tool for predicting beta-turns and their type in a protein or peptide sequence.
A tool for local structure prediction from protein sequence using a structural alphabet approach.
The reference database on protein knottin structural properties..
Our database aims at providing a comprehensive structural view of the Red Blood Cell protein content.
A database of transmembrane protein structures (α-helical and β-sheet) positioned in the lipid bilayer.
Polypronline is a webserver dedicated to the assignment of PolyProline II helices.
PTM-SD provides an access to proteins for which Post Translational Modifications are both experimentally annotated and structurally resolved.
The database MitoGenesisDB focuses on the analysis of mitochondrial proteins.
DoSA (Database of Structural Alignments) provides improved structure-based sequence alignments of homologous proteins especially focusing on the SVRs (Structurally variable regions.
Database for conservation and conformation of disulphide bonds in homologous protein domains.
PB-PENTAPEPT is a platform which combines a database and a few tools to investigate pentapeptides in protein structures.
A suite of tools to explore protein structure dynamics with Protein Blocks
MAIDEN (Model quality Assessment for Intramembrane Domains using an ENergy criterion) is a statistical potential (or pseudo-energy function) optimized on native membrane protein structures.
ORION is a new profile-profile fold recognition approach that relies on a better description of the local protein structure to boost distantly protein detection.
ANVIL (Assignment aNd VIsualization of the Lipid bilayer) is aimed at assigning membrane boundaries to a protein 3D structure.
PredyFlexy predicts from the sequence: (i) the series of Long Structural Prototypes (LSPs), a sophisticated structural alphabet and (ii) the protein flexibility.
KAKSI is a software dedicated to the assignment of classical repetitive secondary structure.
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