Sucrose-specific porin
Organism: Salmonella enterica
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF02264
PDB ID: 1A0S
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 42
Sequence positions:
Q: 78-98|104-122|225-231|243-250|258-264|287-293|309-315|336-342|355-361|374-380|392-399|416-424|441-448|471-480
P: 77-98|105-122|224-231|243-251|257-264|287-293|308-315|336-342|354-361|374-381|392-399|417-424|440-448|472-480
R: 77-89|105-122|225-231|243-250|257-264|287-293|308-315|336-342|354-361|374-381|392-399|417-424|440-448|472-480
Tilt angles:
Q - Segment: 78-98 - Tilt: 35.1°
Q - Segment: 104-122 - Tilt: 45.8°
Q - Segment: 225-231 - Tilt: 33.3°
Q - Segment: 243-250 - Tilt: 36.7°
Q - Segment: 258-264 - Tilt: 38.0°
Q - Segment: 287-293 - Tilt: 34.7°
Q - Segment: 309-315 - Tilt: 35.7°
Q - Segment: 336-342 - Tilt: 35.9°
Q - Segment: 355-361 - Tilt: 36.8°
Q - Segment: 374-380 - Tilt: 34.9°
Q - Segment: 392-399 - Tilt: 38.8°
Q - Segment: 416-424 - Tilt: 41.5°
Q - Segment: 441-448 - Tilt: 36.9°
Q - Segment: 471-480 - Tilt: 45.8°
P - Segment: 77-98 - Tilt: 37.1°
P - Segment: 105-122 - Tilt: 49.5°
P - Segment: 224-231 - Tilt: 30.3°
P - Segment: 243-251 - Tilt: 38.9°
P - Segment: 257-264 - Tilt: 36.7°
P - Segment: 287-293 - Tilt: 35.3°
P - Segment: 308-315 - Tilt: 33.0°
P - Segment: 336-342 - Tilt: 35.6°
P - Segment: 354-361 - Tilt: 34.7°
P - Segment: 374-381 - Tilt: 34.4°
P - Segment: 392-399 - Tilt: 37.8°
P - Segment: 417-424 - Tilt: 37.4°
P - Segment: 440-448 - Tilt: 37.4°
P - Segment: 472-480 - Tilt: 41.5°
R - Segment: 77-89 - Tilt: 53.7°
R - Segment: 105-122 - Tilt: 49.5°
R - Segment: 225-231 - Tilt: 33.4°
R - Segment: 243-250 - Tilt: 37.8°
R - Segment: 257-264 - Tilt: 37.6°
R - Segment: 287-293 - Tilt: 36.5°
R - Segment: 308-315 - Tilt: 34.5°
R - Segment: 336-342 - Tilt: 37.2°
R - Segment: 354-361 - Tilt: 36.1°
R - Segment: 374-381 - Tilt: 35.9°
R - Segment: 392-399 - Tilt: 38.8°
R - Segment: 417-424 - Tilt: 38.4°
R - Segment: 440-448 - Tilt: 37.4°
R - Segment: 472-480 - Tilt: 40.6°
Structural assessment:
MAIDEN score = 140.1782
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]