Bacteriorhodopsin from microcrystals grown in lipidic cubic phases
Organism: Halobacterium salinarum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 1AP9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 5
Sequence positions:
A: 47-62|78-91|112-127|178-195|201-218
Tilt angles:
A - Segment: 47-62 - Tilt: 4.9°
A - Segment: 78-91 - Tilt: 10.4°
A - Segment: 112-127 - Tilt: 3.5°
A - Segment: 178-195 - Tilt: 20.5°
A - Segment: 201-218 - Tilt: 17.8°
Structural assessment:
MAIDEN score = -24.2431
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]