A1c12 subcomplex of f1fo ATP synthase
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00137
PDB ID: 1C17
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.7 Å
Number of TM segments = 28
Sequence positions:
A: 8-30|55-75
C: 7-29|56-77
B: 8-30|55-77
E: 7-29|56-77
D: 7-29|56-78
G: 8-30|54-75
F: 8-30|55-77
I: 9-31|53-74
H: 8-31|53-75
K: 9-32|52-74
J: 9-32|52-74
M: 102-124|142-163|201-222|241-262
L: 8-32|53-75
Tilt angles:
A - Segment: 8-30 - Tilt: 9.9°
A - Segment: 55-75 - Tilt: 15.9°
C - Segment: 7-29 - Tilt: 7.5°
C - Segment: 56-77 - Tilt: 10.1°
B - Segment: 8-30 - Tilt: 9.8°
B - Segment: 55-77 - Tilt: 14.0°
E - Segment: 7-29 - Tilt: 4.2°
E - Segment: 56-77 - Tilt: 11.3°
D - Segment: 7-29 - Tilt: 6.2°
D - Segment: 56-78 - Tilt: 13.7°
G - Segment: 8-30 - Tilt: 3.4°
G - Segment: 54-75 - Tilt: 10.8°
F - Segment: 8-30 - Tilt: 5.0°
F - Segment: 55-77 - Tilt: 14.2°
I - Segment: 9-31 - Tilt: 4.2°
I - Segment: 53-74 - Tilt: 10.8°
H - Segment: 8-31 - Tilt: 5.7°
H - Segment: 53-75 - Tilt: 5.7°
K - Segment: 9-32 - Tilt: 6.9°
K - Segment: 52-74 - Tilt: 0.8°
J - Segment: 9-32 - Tilt: 4.6°
J - Segment: 52-74 - Tilt: 2.3°
M - Segment: 102-124 - Tilt: 11.5°
M - Segment: 142-163 - Tilt: 25.3°
M - Segment: 201-222 - Tilt: 14.9°
M - Segment: 241-262 - Tilt: 17.9°
L - Segment: 8-32 - Tilt: 13.6°
L - Segment: 53-75 - Tilt: 10.2°
Structural assessment:
MAIDEN score = -238.5345
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]