A1c12 subcomplex of f1fo ATP synthase
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00137
PDB ID: 1C17
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 39.9 Å
Number of TM segments = 24
Sequence positions:
A: 4-32|52-78
C: 162-189
B: 83-110|131-157
E: 320-347
D: 241-268
G: 478-505|526-552
F: 399-426
I: 636-664|684-710
H: 557-585|605-631
K: 795-822|841-867
J: 716-743|762-788
M: 955-979|993-1019|1024-1051|1062-1087
L: 874-901|919-947
Tilt angles:
A - Segment: 4-32 - Tilt: 9.1°
A - Segment: 52-78 - Tilt: 7.8°
C - Segment: 162-189 - Tilt: 3.7°
B - Segment: 83-110 - Tilt: 4.5°
B - Segment: 131-157 - Tilt: 8.4°
E - Segment: 320-347 - Tilt: 1.0°
D - Segment: 241-268 - Tilt: 2.5°
G - Segment: 478-505 - Tilt: 1.8°
G - Segment: 526-552 - Tilt: 8.3°
F - Segment: 399-426 - Tilt: 0.7°
I - Segment: 636-664 - Tilt: 5.3°
I - Segment: 684-710 - Tilt: 6.6°
H - Segment: 557-585 - Tilt: 4.5°
H - Segment: 605-631 - Tilt: 7.3°
K - Segment: 795-822 - Tilt: 6.1°
K - Segment: 841-867 - Tilt: 6.2°
J - Segment: 716-743 - Tilt: 4.0°
J - Segment: 762-788 - Tilt: 8.4°
M - Segment: 955-979 - Tilt: 12.1°
M - Segment: 993-1019 - Tilt: 22.6°
M - Segment: 1024-1051 - Tilt: 5.6°
M - Segment: 1062-1087 - Tilt: 13.8°
L - Segment: 874-901 - Tilt: 8.8°
L - Segment: 919-947 - Tilt: 9.3°
Structural assessment:
MAIDEN score = -163.8571
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]