Halorhodopsin, a light-driven chloride pump
Organism: Halobacterium salinarum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 1E12
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.5 Å
Number of TM segments = 6
Sequence positions:
A: 28-48|65-86|104-120|137-154|158-176|202-224
Tilt angles:
A - Segment: 28-48 - Tilt: 32.2°
A - Segment: 65-86 - Tilt: 12.0°
A - Segment: 104-120 - Tilt: 6.2°
A - Segment: 137-154 - Tilt: 8.1°
A - Segment: 158-176 - Tilt: 15.3°
A - Segment: 202-224 - Tilt: 13.9°
Structural assessment:
MAIDEN score = -41.6514
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]