Tolc: an integral outer membrane protein and efflux pump component from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF02321
PDB ID: 1EK9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 8
Sequence positions:
A: 104-129|177-199|419-425
C: 286-292|315-407
B: 41-49|63-74|232-260
Tilt angles:
A - Segment: 104-129 - Tilt: 63.5°
A - Segment: 177-199 - Tilt: 47.3°
A - Segment: 419-425 - Tilt: 16.4°
C - Segment: 286-292 - Tilt: 25.9°
C - Segment: 315-407 - Tilt: 45.2°
B - Segment: 41-49 - Tilt: 43.1°
B - Segment: 63-74 - Tilt: 56.3°
B - Segment: 232-260 - Tilt: 72.5°
Structural assessment:
MAIDEN score = -6.0404
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]