Tolc: an integral outer membrane protein and efflux pump component from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF02321
PDB ID: 1EK9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
A: 111-139|167-193
C: 1050-1059|1102-1108|1139-1146|1203-1276
B: 471-479|489-515|650-691|733-757
Tilt angles:
A - Segment: 111-139 - Tilt: 64.4°
A - Segment: 167-193 - Tilt: 40.8°
C - Segment: 1050-1059 - Tilt: 8.5°
C - Segment: 1102-1108 - Tilt: 27.3°
C - Segment: 1139-1146 - Tilt: 37.8°
C - Segment: 1203-1276 - Tilt: 47.9°
B - Segment: 471-479 - Tilt: 50.0°
B - Segment: 489-515 - Tilt: 72.2°
B - Segment: 650-691 - Tilt: 77.2°
B - Segment: 733-757 - Tilt: 64.7°
Structural assessment:
MAIDEN score = 147.9532
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]