Photosynthetic reaction center from a thermophilic bacterium, thermochromatium tepidum
Organism: Thermochromatium tepidum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00124
PDB ID: 1EYS
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 11
Sequence positions:
H: 9-28
M: 55-73|112-131|145-168|198-221|266-286
L: 29-50|97-116|123-139|179-199|237-255
Tilt angles:
H - Segment: 9-28 - Tilt: 30.9°
M - Segment: 55-73 - Tilt: 14.3°
M - Segment: 112-131 - Tilt: 24.6°
M - Segment: 145-168 - Tilt: 36.2°
M - Segment: 198-221 - Tilt: 41.9°
M - Segment: 266-286 - Tilt: 27.4°
L - Segment: 29-50 - Tilt: 18.3°
L - Segment: 97-116 - Tilt: 21.6°
L - Segment: 123-139 - Tilt: 15.1°
L - Segment: 179-199 - Tilt: 27.5°
L - Segment: 237-255 - Tilt: 10.2°
Structural assessment:
MAIDEN score = -110.2861
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]