Photosynthetic reaction center from a thermophilic bacterium, thermochromatium tepidum
Organism: Thermochromatium tepidum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00124
PDB ID: 1EYS
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 11
Sequence positions:
H: 911-933
M: 644-664|701-722|734-760|785-811|854-876
L: 325-360|406-425|432-452|488-509|546-566
Tilt angles:
H - Segment: 911-933 - Tilt: 33.5°
M - Segment: 644-664 - Tilt: 16.3°
M - Segment: 701-722 - Tilt: 23.6°
M - Segment: 734-760 - Tilt: 27.2°
M - Segment: 785-811 - Tilt: 34.1°
M - Segment: 854-876 - Tilt: 34.1°
L - Segment: 325-360 - Tilt: 40.2°
L - Segment: 406-425 - Tilt: 12.4°
L - Segment: 432-452 - Tilt: 2.7°
L - Segment: 488-509 - Tilt: 22.4°
L - Segment: 546-566 - Tilt: 13.6°
Structural assessment:
MAIDEN score = -66.8170
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]