Ubiquinol oxidase from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00115
PDB ID: 1FFT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 32.4 Å
Number of TM segments = 19
Sequence positions:
A: 6-33|50-73|87-111|136-159|178-201|224-247|264-283|293-315|331-353|362-385|401-424|442-466
C: 765-785|806-828|835-856|881-905|915-937
B: 519-541|563-583
Tilt angles:
A - Segment: 6-33 - Tilt: 44.1°
A - Segment: 50-73 - Tilt: 21.3°
A - Segment: 87-111 - Tilt: 37.2°
A - Segment: 136-159 - Tilt: 29.1°
A - Segment: 178-201 - Tilt: 25.3°
A - Segment: 224-247 - Tilt: 28.7°
A - Segment: 264-283 - Tilt: 20.3°
A - Segment: 293-315 - Tilt: 27.8°
A - Segment: 331-353 - Tilt: 33.3°
A - Segment: 362-385 - Tilt: 19.7°
A - Segment: 401-424 - Tilt: 28.5°
A - Segment: 442-466 - Tilt: 34.0°
C - Segment: 765-785 - Tilt: 22.0°
C - Segment: 806-828 - Tilt: 7.7°
C - Segment: 835-856 - Tilt: 18.8°
C - Segment: 881-905 - Tilt: 34.4°
C - Segment: 915-937 - Tilt: 25.5°
B - Segment: 519-541 - Tilt: 15.8°
B - Segment: 563-583 - Tilt: 10.4°
Structural assessment:
MAIDEN score = -198.7629
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]